Mangifera indica (mango): 123192561
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Entry
123192561 CDS
T07684
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
minc01009
]
123192561
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123192561
Enzymes [BR:
minc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
123192561
Protein phosphatases and associated proteins [BR:
minc01009
]
HAD phosphatases
Fcp/Scp phosphatases
123192561
Transcription machinery [BR:
minc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
123192561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Motif
Other DBs
NCBI-GeneID:
123192561
NCBI-ProteinID:
XP_044461081
LinkDB
All DBs
Position
12:13453305..13462104
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AA seq
944 aa
AA seq
DB search
MYKTVVYEGKEKLGEVEIFPQQGEEEKKNMKVFDEIRISYYTEASERCPPLAVLHTITSS
GICFKMESKSSDNIQLHLLHSSCIRENKTAVMPLGAEELHLVAMYSKSHERQCPCFWGFI
VASGLYNSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALLRKISTEVDPQRIAGM
QAEIKRYQEDKSILKQYADNDQVIENGKVIKVQSEVVPALSDNHQTIVRPLIRLQEKNII
LTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPES
NLINTKELLNRIVCVKSGSRKSLFNVFQDGICHPKMALVIDDRLKVWDEKDQPRVHVVPA
FAPYYAPQAEANNTVPVLCVARNVACNVRGGFFKEFDDGLLQRIPEISYEDDLTDIPLPP
DVSNYLVSEDDASLMNGNKDPLTFDGMADAEVERRLKDAMSASSTISSALTDLDPRLASL
HYTMPTSSSSIPLPTSQVANLPFPNVQFSSAASLVKPLGHVVPQEPSLQSSPAREEGEVP
ESELDPDTRRRLLILQHGQDTRDQPPSEPSFPVRPPMQVSAPRVQSRGSWFPSEEEMSPR
QLNRAGPKEFPLDSEPMQTDKPRPHHPSFFPKIESSVPPDRLHENQRLTKEPLRRDDRLR
LNHNLSSYNSFSGDEVPLSHSSSSNSKDFDFESGRDISSAESPAVVLQDIAIKCGAKVEF
RPALVVSMELQFSIEAWFAGEKIGEGMGRTRREAQRQAAEASIKNLANVYMSRLKPDSGS
AIGDVSRFSNTNDNGFSGNFNSFSTASEPSTLLDPRPEVSKIPMGSVSALKELCMMEGLG
VAFSKLSPSSVNSNQNDEVYAQVEIDGQVLGKGIGSTWDEAKMQAADKALGSLRSMFGQF
PQKRQGSPRSFQGMSSKRLKPDFPRVLQRMPPSGRYPKNAPPVP
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaacggtggtgtatgaaggaaaagaaaaattgggggaagtagagatatttccg
caacaaggagaagaagagaagaagaacatgaaagtgttcgatgaaatcagaataagttac
tacacggaagcgagtgagagatgtccgccactggcagtgctacataccattacgtctagt
gggatttgcttcaaaatggagtctaaatcatcggacaacatccagctacatctattgcac
tcctcctgtatcagagaaaacaagactgcagtgatgccactgggggcagaggagcttcat
ctggttgccatgtattctaagagtcatgagaggcagtgtccatgtttctggggattcatt
gttgcatctggactgtataattcttgtctcgtcatgttgaaccttagatgtcttggtatt
gtttttgatctggatgaaacccttatagttgcaaatacaatgcgctcatttgaggataga
attgaagctttgctgcgtaaaataagcactgaggtggatccacagcgcattgctggtatg
caggctgagatcaagcgctatcaagaggacaagagtatattgaagcaatatgctgacaat
gatcaggttattgaaaacgggaaggtgatcaaagttcagtcagaggttgttccagcattg
tctgacaaccatcaaactattgttcggccacttatacggttacaagagaaaaacatcata
ctgactcgcatcaacccgcagattcgtgataccagtgttcttgtgaggttgagacctgca
tgggaagatctacgtagctacttgactgctaggggacgcaagcgttttgaggtctatgtt
tgcacaatggcagaaagggattatgctttggaaatgtggaggcttcttgatccagagtca
aatctgataaatactaaggaattgttgaatcgcatcgtgtgtgtcaaatctggttcaagg
aagtcattgtttaatgtctttcaagatggaatttgccatcctaagatggcacttgtgata
gatgatcgcttaaaagtgtgggatgagaaagatcaacctcgggtgcatgttgtccctgcg
tttgctccatactatgctcctcaagctgaagcaaataatacagttcctgtcttgtgtgtg
gcgagaaatgttgcttgcaatgttagaggtggttttttcaaagagtttgatgatggtctt
ttacaaaggatacctgaaatttcatatgaagatgaccttactgatattcctttgcctccg
gatgtgagcaactatttggtttctgaggatgatgcttctctcatgaatggaaacaaagat
ccacttacttttgatggcatggcagatgcagaggttgaaagaagacttaaggatgcaatg
tcagcttcttcaaccatctcttcagctctcacagatcttgatccaaggcttgcttcactt
cattacacaatgccaacttcttctagctcaattcctctcccaacgtctcaagtagcaaat
ttgccatttcccaatgtgcagttttcttcagcagcttcgttagtgaaaccattgggtcat
gttgtcccacaagaaccaagcttgcaaagttctcctgctagagaagagggtgaggtgcca
gaatcagaattagatcctgatactaggaggcgacttctcatattgcaacatgggcaagat
acaagagatcagccaccaagtgaaccctcatttcctgtaagacctccaatgcaagtttca
gctccacgtgtgcagtcacgtggaagttggtttccatctgaagaagagatgagccctcga
caactgaaccgagcaggacccaaagaatttcctttagattctgagccgatgcaaactgac
aagcctcggcctcatcatccatctttttttcctaagattgagagttctgttccacctgat
agacttcatgaaaatcaaagattgacaaaagagccacttcgtagagatgatcggttgagg
ttaaaccacaacctgtctagttataattctttctcaggtgatgaggtccccttgagccat
tcatcttctagcaacagcaaggattttgactttgaatctggacgagatatttctagtgca
gaatctccagctgtagttttacaggatattgcaataaagtgtggagccaaggtggaattc
aggccagctttggttgttagcatggaattacagttctccattgaggcttggtttgcagga
gagaagataggtgaaggaatgggtagaacacgaagggaagcccagcggcaggctgctgag
gcatccatcaagaacttggctaacgtatatatgtcacgtctaaagcccgattctggttct
gccatcggagacgttagtagattttctaacacaaatgataatgggttttcgggtaatttt
aattcattctcaactgcgtcagaaccatctacacttctagatccaaggccggaggtctct
aagataccaatgggttcagtgtctgcacttaaagaattatgcatgatggagggccttgga
gttgctttttccaaattgtctccgtcatcagttaactccaaccagaatgatgaagtatat
gcacaggttgaaattgatggtcaggtgttaggaaaggggattgggtcaacctgggatgaa
gctaagatgcaggcggctgataaggctcttggaagcctaaggtcaatgtttggtcaattt
cctcaaaaacgtcagggatccccaaggtcatttcaagggatgtcaagtaaacgcctaaag
ccagacttcccacgagttttacagcggatgccaccttctggtagatatcccaagaatgct
cctcctgttccttga
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