Mangifera indica (mango): 123192831
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Entry
123192831 CDS
T07684
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
minc04131
]
123192831
04121 Ubiquitin system [BR:
minc04121
]
123192831
Enzymes [BR:
minc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123192831
Membrane trafficking [BR:
minc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
123192831
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123192831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
Rad50_zn_hook
zf-C3HC4_3
DUF7129
zf-ANAPC11
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
123192831
NCBI-ProteinID:
XP_044461423
LinkDB
All DBs
Position
12:complement(9340978..9342822)
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AA seq
394 aa
AA seq
DB search
MSTIVSSTSYWCYRCNRFVRVLNRETITCPDCDGGFVEEIENPPRGIQTTDIQHRGRRRF
PAAAMYMIGSNSNNIHNNRSNRDQNSSTGPLLRRSRRTGGDRSPFNPVIVLRGPDRAVPG
ADVENNGSGYELYYDDGEGAGLRPLPRSMSEFLLGSGFERLIEQLSQIDMNGIGGYEHPP
ASKAAIESLPFIFIDASHVELESHCAVCKEAFELGSEAREMPCKHIYHSDCILPWLCLRN
SCPVCRHELPSDNNQAISEESENGVNGEGQISGSNNDVETVGLTIWRLPGGGFAVGRFAG
GRRGGEREFPVVYTEMDGGFNNSGGVPRRVSFGSRGNRGERDRGGVIQRAFRNLIGCFSG
SVGSSSASDSRIRRRSRTASLFNISTRGRRGWDV
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtctactatagtttcgtcaacgtcttattggtgttacagatgcaaccggttcgttagg
gttttgaatcgagaaacaattacatgtcctgactgcgatggcggattcgtggaggagatc
gagaatccgccacggggaatccaaaccaccgacatacaacaccgcggacggaggaggttt
cctgcagccgcgatgtacatgatcggtagtaatagtaacaacatccacaataatcgctct
aatcgagatcagaattcctcaaccggcccgcttcttcgtagaagccgaagaaccggcggc
gatcggtctcctttcaatccagttatcgtacttcgtggaccggacagggcggttcccgga
gcggatgttgaaaataacggtagtggttatgaattgtattacgatgacggtgaaggcgcc
ggtttgagaccgttaccacgtagtatgtcggagtttttgttaggatctggatttgaacgg
ttgattgagcagttatcacagattgatatgaatggaatcggcggttatgagcatccaccg
gcttcaaaagccgcgattgaatctttgccgttcatttttatcgacgcgagtcatgtagaa
ctggaatcacactgtgctgtttgtaaagaagcatttgaattaggatctgaagcgagagaa
atgccatgtaaacatatttaccattcagattgtatactcccgtggttgtgccttcgtaat
tcctgcccggtttgcaggcatgaattgccttctgataataaccaagccattagtgaagag
tccgaaaatggagtcaatggggaaggacaaatttcgggctcgaataatgatgtggagacc
gtaggattaacgatatggaggttaccaggtggagggtttgcggtggggcggttcgcggga
ggaagaagaggcggtgaaagagaatttccggttgtttacacagagatggatggtgggttt
aacaatagtggaggtgtgcctaggagagtttcgtttgggtcaagagggaatagaggagag
agagacaggggaggggtgattcaaagggcttttcgtaatttgattgggtgttttagcggg
tcagtcggttcgagttcggcctcagactcaaggataaggagaaggagtagaacggcttcg
ttattcaatatctccacgagggggagaaggggttgggatgtttag
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