Mangifera indica (mango): 123192934
Help
Entry
123192934 CDS
T07684
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
minc
Mangifera indica (mango)
Pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123192934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123192934
Spliceosome [BR:
minc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
123192934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
123192934
NCBI-ProteinID:
XP_044461584
LinkDB
All DBs
Position
12:complement(6912878..6918703)
Genome browser
AA seq
567 aa
AA seq
DB search
MPRKRENDASGIEDGYSKKLKVAEDQSSPSPSRLGFENPLLPLANTYDDDEEDEEENGRR
VLNADGGGYSRAKDERNGNGAQEDGDDEDEDDYGDQGIGQGKRNRVVELRRDCPYLDTVN
RQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKV
YCLPDGYEINDPSLDDIRHVLNPRFTEEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKE
TDFVNVTIQSLMRVTPLRNFFLMPENYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEF
LQAVMKASKKRFRIGAQSNPVEFMSWLLNTLHADLRTSKKNTSIIYDCFQGELEVIKEIP
GSAITEKKENGDDHSTSQITDGGSEHSTIVTETSRMPFLMLGLDLPPPPLFKDVMEKNII
PQVPLFNILKKFDGEMVTEVVRPRVARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLV
NFPVKNLELKDYIPLPTPKENEKLRSKYDLIANIVHDGKPEEGFYRVFVQRKSEELWYEM
QDLHVSETLPQMVALSEAYMQIYEQQR
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggaagagggaaaatgatgctagcgggattgaagatgggtattcaaagaagcta
aaagtggcagaagatcagtcatcgccatccccttctcgccttggttttgagaacccacta
ttacccttagctaacacatatgatgatgatgaggaggatgaggaagaaaatgggagaagg
gtacttaatgctgatggtggaggatacagtagagccaaggatgaacgaaatggtaatgga
gctcaagaagatggggatgatgaggatgaggatgactatggtgatcaggggattggtcaa
gggaaacgaaacagagttgttgaattgcggagggactgcccatatcttgatactgttaat
cgtcaggttttggattttgattttgagaagttttgctctgtttcactgtcaaacttgaat
gtgtatgcttgtttggtttgtgggaagtattaccaaggaagaggacagaagtcccatgca
tatactcatagtttggaagcaggccaccatgtctatatcaaccttcgaacagagaaagtt
tattgtcttcctgatggatatgaaattaatgacccatcattggatgatatccgtcatgtg
ctaaacccaaggtttaccgaggaacaagtagaacagctcgacaaaaataagcagtggtct
agggcattggatggttcagactacctgccaggaatggtgggtttgaataacattaaggag
actgattttgtgaatgtcacaattcagtccctaatgagagttactccattgagaaatttc
tttcttatgcctgaaaactatcaacactgtaaatctccacttgtccatcgatttggagaa
ctcacaagaaagatttggcatgctcgaaactttaaaggacaggtgagcccacatgaattt
ctgcaagcagttatgaaagccagtaaaaagcgttttcgtataggcgcacagtccaatcct
gttgaattcatgtcatggcttcttaacacactgcatgcagatcttagaacatcaaagaaa
aataccagtatcatctatgactgctttcagggggaattggaggttatcaaggagattcct
ggtagtgcaatcaccgagaagaaagaaaatggtgatgaccatagtacttctcaaataact
gatggtggaagtgaacatagtactattgtgacagaaacttctagaatgccattcctgatg
cttggcttggatttgccaccaccgcctcttttcaaagatgtgatggaaaaaaatatcatt
cctcaggttccattatttaatatattgaagaagtttgatggggaaatggtgactgaggtt
gttcgtcctcgggtggcaaggatgagatatcgtgtcacgagattaccacaatatttgatc
cttcacatgcggcgcttcacaaagaataacttttttgtggaaaagaatcctactttggtc
aactttcctgtgaaaaatttggaattgaaggactacattcctttgccaacaccgaaagag
aatgagaaattgcgttccaagtatgatttgattgccaatattgttcatgatggtaaacct
gaggagggattctacagggtttttgtgcagcggaagtcagaagaattatggtacgagatg
caggacctgcatgtttcagaaactcttcctcaaatggttgcactctctgaggcttatatg
cagatatatgagcagcagcgatag
DBGET
integrated database retrieval system
