Mangifera indica (mango): 123193185
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Entry
123193185 CDS
T07684
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
minc
Mangifera indica (mango)
Pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123193185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123193185
Spliceosome [BR:
minc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123193185
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
123193185
NCBI-ProteinID:
XP_044461921
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Position
12:complement(9031277..9035452)
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AA seq
843 aa
AA seq
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MDRPSEKDKVSKRSLEDREREHKHRHRDRDERHREREHHHHRSSSDQKSSKREDWESSRD
RDFKREKSHDNHRESRRDTERSHEREGTKHREREVNREELDGDDVEIDVRKKRKEREESE
ERGEKKAKVSDDQRGKRRFEDCFVKQEDSEGISGNVKFNEVNVTKEVSDDDATVRGGSAK
PNGATVDSYNVVSRTVPETSVATGDHPLPTKVSSIHTTNENKGVSITRSHEVPGKSSTDG
TSSIAGKSGSLSLDALAKAKKALQMQKELSEKLKKIPMLNKGTSSDGSSLSGSKEGVKAA
SSGTGIIQGTVSTTANALSAGVMPSSSILPAAAATSVKPPASGLPTIPTLTNIPNIEAVK
RAQELAAKMGFRQDPEFAPLINLFPGQIPTDVVVPQKPTKAPVLRVDALGREIDEHGNVV
NVTKPSNLSTLKVNINKQKKDAFQILKPELEVDPEFNPHFDQRMGINKNKVLRPKRMTFQ
FVEEGKWSKEAEMLRVKSQFGEAGAKERQAKQAQLAKVKGGADINPNLIEVAERVLTKEK
PKDPIPEIEWWDMPLLLNGSYGDISDGGIIEDKLKKEKITIYVEHPRPIEPPAEPAPPPP
QPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTR
LEKEIRSAAAEREQAHIDRNIARKLTPAERREKKERKLFDDSTSLDTTVSVYKINDLSHP
KTRFKVDVNAHENRLTGCVVITEGISVVVVEGGSKSIKRYGKLMLRRIDWAKAVNEEDED
EDEISEKPVNKCMLVWQGSAAKPSFNRFSVHECMTEAAAKKVFADAGVAHYWDLAVNFTE
DQM
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggatcggccctccgagaaagacaaagtgtccaaacgttcacttgaagaccgtgaacgt
gaacacaagcaccgtcacagagaccgagacgaaagacaccgtgagagagagcaccatcac
caccgatcatcgtcagaccaaaaatcctcgaagcgcgaggactgggagagttcacgcgac
cgcgatttcaagcgtgagaagtcgcatgacaatcatcgggagtcgaggcgcgacacagag
agatctcatgagagggagggaacgaagcatcgtgaacgtgaagtgaatcgcgaggaattg
gacggtgatgacgtggaaattgatgtgagaaagaagaggaaagagagagaggagagcgag
gagagaggagagaagaaggctaaggtttcggatgatcagagagggaagagaaggtttgag
gattgtttcgtaaaacaagaggacagcgagggtatttctggaaatgtgaagtttaacgaa
gttaatgtgacgaaagaagtgagtgatgatgatgcgacggttcgtggtggctccgccaag
cctaatggtgccactgttgattcgtataatgtggtatcaaggactgtgcctgagacttct
gtggccactggtgatcatccccttcccacaaaggtatcttcaattcataccacaaatgaa
aataagggagttagtattaccagatctcatgaggttcctggaaaatctagtacagatggg
acatcttcaattgctgggaaaagtggaagtctatccctagatgctttagcaaaagctaag
aaagctttacaaatgcagaaggaattgtcagaaaagctgaagaagataccaatgttgaac
aagggcacaagttcagatggtagctcactctctggatcgaaggagggagtgaaagcggca
tcctctggtactggaataattcagggaacagtttcaacaactgcaaatgctttgtcagct
ggtgtaatgcctagttcatcaatcttaccagctgcggcagcgacttctgtgaagccacct
gcaagtggactgcctaccattcccacccttactaatatacccaacattgaagctgttaaa
cgtgctcaagagcttgctgctaaaatgggttttcgtcaggaccctgaatttgcacctctt
ataaacctatttcctgggcagataccaacagatgttgttgttccccagaagcctaccaag
gctcctgttcttcgagtggatgcacttggtagggaaatagatgaacacggaaatgtagtg
aacgtgactaaaccaagcaatcttagcacactaaaggtcaacatcaacaaacagaaaaag
gatgcattccaaattcttaaacctgagttggaggtggatccggaatttaatcctcatttt
gaccagagaatgggtataaataaaaataaagttttgagacctaaacggatgactttccag
tttgtagaggaaggaaaatggtctaaagaagctgagatgcttagagtcaagagtcaattc
ggagaagctggagcaaaggagcgacaggcaaagcaagcccaattggcaaaagtgaaggga
ggggctgacattaatcctaatttgatagaggtagcagaaagagttttgaccaaggaaaaa
cctaaggacccaatacctgaaatagagtggtgggatatgcctctattgcttaatggttct
tacggtgacatatctgatggtggcataatagaagataaactaaagaaggaaaaaatcacc
atctatgttgaacatcctcgtcctattgagcctcctgctgagccagcccctccccctcct
cagccactgaaactaaccaagaaggaacaaaagaaactccgtactcagaggcggctggct
agggagaaagatagacaggagatgattagacaaggcttgattgaacctcctaaacctaaa
gttaaaatgagcaatttgatgaaagttcttggttctgaagcaacccaagatccaactagg
ctagaaaaagaaatccgtagtgctgctgctgagcgtgaacaagctcatattgataggaat
attgcccgcaagcttacacctgctgagcggcgagagaagaaagagagaaaactatttgat
gactctacttcacttgatactactgtttccgtttacaagatcaatgatctttcacaccca
aaaacgcgtttcaaagttgatgttaatgctcatgaaaaccgtttaacaggttgtgttgta
atcactgagggaattagtgttgtggttgttgaaggtggaagcaaatccatcaagagatac
gggaaacttatgcttagacgcatagactgggcaaaagcagtgaatgaagaagatgaagat
gaagatgagatttctgagaaacctgtcaataagtgcatgctagtttggcagggcagtgct
gccaaaccaagcttcaatagattttctgttcatgagtgcatgactgaagcagccgccaag
aaagtttttgccgatgctggggtagcacattactgggatctggcggtgaacttcacggaa
gaccaaatgtaa
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