KEGG   Mangifera indica (mango): 123193863
Entry
123193863         CDS       T07684                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A isoform X1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
minc  Mangifera indica (mango)
Pathway
minc03020  RNA polymerase
minc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    123193863
  09124 Replication and repair
   03420 Nucleotide excision repair
    123193863
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:minc03021]
    123193863
   03400 DNA repair and recombination proteins [BR:minc03400]
    123193863
Transcription machinery [BR:minc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     123193863
  RNA polymerase III system
   RNA polymerase III
     123193863
  RNA polymerase I system
   RNA polymerase I
     123193863
DNA repair and recombination proteins [BR:minc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      123193863
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N OB_RNR_1st NA-iREase1 DNA_pol3_alpha Mrr_cat
Other DBs
NCBI-GeneID: 123193863
NCBI-ProteinID: XP_044462868
LinkDB
Position
13:11606864..11609354
AA seq 206 aa
MTLSDEEIKRLFRIRKTVMQMLKDRGYFVGDFEINMTKEQFLSKYGENMKREDLVINKAM
RNNSSDQIYVFFPDEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISAK
FQLEVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLKRYTVKETQLPRIQVTDPIARYYG
LKRGQVVKISRPSETAGRYITYRYVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atgactctgtcggatgaagaaatcaaaaggcttttcagaatcaggaagacagtgatgcag
atgctgaaggatcggggttattttgttggagattttgaaattaacatgaccaaagagcag
ttcctctcgaaatatggtgaaaacatgaaaagggaggacctggttatcaataaagcaatg
cgaaacaatagctctgatcagatttatgttttctttcccgacgaacaaaaagttggcgtt
aagacaatgaagacctataccaatcgtatgaaatcagagaatgtgttcagagctatattg
gtggttcaacagaacttgaccccctttgcacgaacatgtataaatgagatctctgcaaaa
ttccagttagaagttttccaggaggcagagcttttagtcaacatcaaagaacatgtgctt
gttcctgagcatcaggtgcttactaatgaagagaagaaaacattgctgaagaggtacaca
gtgaaggaaacacaattgccgcgcattcaagtgactgatccaattgcaagatactatggg
ctgaagcgtggacaagttgtgaagattagccggccaagtgagactgctggccgatatatc
acctatcgatatgttgtataa

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