Mangifera indica (mango): 123194389
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Entry
123194389 CDS
T07684
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
minc
Mangifera indica (mango)
Pathway
minc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123194389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123194389
03036 Chromosome and associated proteins [BR:
minc03036
]
123194389
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123194389
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
123194389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
123194389
NCBI-ProteinID:
XP_044463513
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All DBs
Position
13:13091321..13097703
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AA seq
718 aa
AA seq
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MSVAVSGTGEDNGAALVPYSNEAKKPVVYPLRHGLRPPISRLAISWSRGNTLRVSVFRKP
SPSEDSGDECGGKVVELRLGNEGGEISDAQWRRIAYGSVSPFALLQSRRNSVSSLSKMSF
NSSPYHVEWWEYVLEYSKDLSLLLSNSQSPPPSLIEDPKVVLKKVDEPTCLKAAWELMEV
FYADKLSQAWLPERLVDWLAVYESLFSGTQVTVHSKLVDFQKDLISLQVIEDDPKYWEVM
SSALAIGWLEIVVKLLRLHGSYQIDQLGNRETENGLVEAVAVLISKMPRMRPELETGKLG
ECYKAKPDFIKAWEKWRTQITKLECSAFWVQCAHRQTREGLRNMLQIMLGNTNCLCTATC
HWIELYISHFLYVRPFTVGLESMYSLAQKCIQLKPMASSHSLMGLMIGILGENIEVVLAE
CSKGFGPWMVTHAIELLAAGSDQADILLHEEHAKLGEVSMEELHRLVYAQVLASHALTWQ
IAPIYLASCMKQGIGLLEILLYRQPVYHNQLLLKSIEICRLYELDSVSSNIMKIAGMYHW
KHGRKGSGIFWLQQARDEVRLNRIAQQMFDSVGKSISDENFRQWEGLIQLLSSESKTVGG
LDFLHKYRDFKKSLMQIHDGKTTDTACQAVESLISLMKNPSTPQRFWLPLLYDSLKLLTW
QERPLLNVVQTNLLLNKLQELSMARLRPDYIEADLPPKALSSVRLALATNLGRAILEE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcgccgtttcaggcaccggcgaagataacggggccgctttggttccgtactcg
aacgaggctaagaagccagtggtctatcctcttcgacacggcctgaggccgccaatctct
cggcttgctatctcatggtcccgaggcaacactcttcgtgtctcagttttccggaaacca
tctccatccgaagattctggtgatgaatgtggaggtaaagtggtagagttgcggcttggc
aatgaaggcggagagatcagcgacgcgcagtggagaagaatagcgtacgggtcggtctct
ccctttgctcttcttcagagtcgaagaaattctgtctctagcttgtcaaagatgtccttt
aattcgtcgccgtatcacgtagaatggtgggagtatgtattggagtacagcaaggaccta
agtttacttcttagtaattcacagtcacctcctccatctctaattgaagatccaaaggtt
gttttaaagaaagttgatgagccaacctgtttgaaggcggcatgggagctgatggaagta
ttttatgctgacaagctttctcaagcatggctacctgaacgtcttgttgattggttagct
gtttatgaaagcctcttctcaggcacacaagtgacggtccattctaaacttgtggatttt
caaaaggaccttatcagcctacaggtaattgaggatgatcccaaatattgggaagttatg
tcatcagcactagcaattggttggctggagattgtggtgaaattgctgcgcttacatgga
tcttatcagatagatcagcttgggaatcgtgagacagagaatggcctggtagaggcagtt
gccgtgcttatttcaaaaatgccccgcatgcgtccagaactggaaactggaaaactgggt
gaatgctataaagctaagcctgattttatcaaggcatgggagaaatggcggacacaaata
actaagctggaatgtagtgcattttgggttcagtgtgctcatcgtcaaactcgagagggc
ctgagaaatatgctgcaaatcatgttggggaacactaattgtctctgcactgcgacatgt
cattggatcgagctttatatctctcactttctatatgtcaggccattcactgtggggtta
gaaagtatgtacagtctggctcaaaaatgcattcagttgaaaccaatggccagttcccat
agtttgatgggactcatgattgggattctaggcgagaatattgaggttgtgttagcagag
tgctccaaaggatttggtccttggatggtcactcacgccatagagctgttggctgctggg
agcgatcaagcagatattcttttgcatgaagagcatgctaagctcggtgaggtcagcatg
gaggagctccatcgacttgtctatgctcaagttttggcttctcatgcattgacttggcaa
atcgctccaatttatttggcatcatgcatgaagcagggaatcggtttgttggagatatta
ttgtacaggcaacctgtttatcataatcagttgctacttaagagtatagagatatgccgc
ctatatgaacttgacagtgttagttcaaacattatgaagattgctggaatgtaccactgg
aagcatggcaggaaaggttctggaattttctggcttcagcaagctcgagatgaagttcgg
cttaacaggatcgctcagcagatgtttgattcagttggaaagtctatctctgacgaaaat
ttcaggcaatgggaaggtttaattcaattgttgagttctgaatctaagactgttggaggt
cttgactttctacacaagtacagagattttaagaaatctcttatgcagattcatgatgga
aaaactacagatactgcttgccaagctgtagaatcgcttatatcacttatgaaaaatcca
tctacacctcagcgcttctggttgcctcttctctatgattcgttgaaactgcttacctgg
caagagaggcccctgctaaacgtcgtgcagacgaatcttttgttgaataaactacaagaa
ttatccatggcaaggctaaggccagactacattgaagccgacctgccacccaaggcattg
agctctgttagattagctctcgcaacaaatcttggacgtgccatcctggaagaataa
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