Mangifera indica (mango): 123194444
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Entry
123194444 CDS
T07684
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123194444
Spliceosome [BR:
minc03041
]
Common components
Common spliceosomal components
General mRNP proteins
123194444
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
123194444
NCBI-ProteinID:
XP_044463576
LinkDB
All DBs
Position
1:11530611..11541185
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AA seq
579 aa
AA seq
DB search
MVFDEYEYLEKTVEEQQPPKEDDYSEKKKAKREGAEKSERSYRKREDSEEEEEWLKTSKR
SRHEDDNGGRRERDRERENERDRERDKHQSRRDREKERDSERDRERSREKEKDKERREKD
RDREKDREKEKERERRERREREKEKERERSSSRSRRSSSRSRRDSEREKEREREREIRER
ERDLEMRESRRYKEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVR
LIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVPSNASAGG
APSGLYGAIDRKLYVGNLHFNMTEIQLRQLFEPFGPVELVQLPLDIETGQCKGFGFVQFA
QLEHAKAAQSALNGKLEIAGRTIKVSSVTDHVGVQDTAAKSADFDDDDGGGLALNAQSRA
LLMQKLDRTGIATSIAGSLGGPMVNGTVANQQAVSFPVIGPSAVPIPAVTAPVIPAPVSE
FIGYPSECLLLKNMFDPAAETDLDFDLEIKEDVEEECSKYGRVMHIHVDKNSAGFVYLQF
ESVEAAAAAQRAMHMRWFARRLISALFMKPEDYEGKFKG
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgacgagtacgagtatttggagaagactgtggaggagcagcagccgccgaag
gaggacgactactcagagaagaaaaaggcgaagcgagaaggagcggagaagagtgaacgg
agttatcggaagagagaggatagtgaagaggaggaggagtggctgaagactagtaagaga
tcgcggcacgaggatgataatggcgggaggagagagagggatagggagagggagaacgag
agagatagagaacgggataagcatcagagtcggagagatcgggagaaggagagggatagt
gagagagatcgcgagaggagtcgagagaaggagaaagataaggagaggagagagaaagat
cgggacagagagaaggatcgggagaaagagaaggagagggagagaagagagaggagggag
agagagaaggaaaaggagagggagaggagtagcagtaggtcgaggagaagtagtagtcgg
tcaaggagagatagtgaacgcgagaaggagagggagagagagagggagattagggagaga
gagcgtgatcttgaaatgcgagagagcaggagatataaagaaaagaaagaagtcgtggag
ccggaagctgatccagagagggatcagagaaccgtttttgcttatcagatgcctctaaaa
gcgactgaaagagatgtttatgagttcttctcaaaagcgggcaaggtgagggatgttcga
ctgattatggatcgtaattcaaggaggtcaaaaggagttgggtatattgaattttacgat
gtgatgtctgtgccaatggcaatagccttgtctggccaattacttcttggacaacctgta
atggttaagccttctgaagctgaaaagaatcttgttccatctaatgcttctgctggtggt
gccccctctggactgtatggagctatcgatagaaagctttatgtgggaaatttacacttt
aacatgaccgagattcagcttagacagctttttgaaccgtttggccctgtggagcttgtg
caacttccccttgacattgaaacagggcaatgcaaaggtttcgggtttgttcagtttgct
cagcttgagcatgcaaaggcagctcaaagtgctctgaatggaaaattggagattgctggt
cggactattaaggtctcgtctgttacagatcatgttggagtccaggatactgctgcaaaa
tctgcggactttgatgatgatgacggtggtggactggctttaaatgctcagtcaagagca
ttgcttatgcagaagctggatcgtactggcatagccacaagtattgcgggctcacttgga
gggccaatggttaatgggacagttgcaaatcaacaggctgttagcttccctgtcattggg
ccatctgcagtccctattcctgctgttacagctccagttattcctgctccagtctctgaa
tttattggatatccaagcgagtgtttactgttaaagaatatgtttgatcctgcagcagag
accgacctggattttgatttggaaataaaagaagatgtggaagaagaatgttccaaatat
ggccgggtgatgcatatacatgtggacaagaacagcgctggttttgtatatctacagttt
gaatctgtggaagctgcagcagctgctcaacgggcaatgcatatgagatggtttgcacgc
agattgatatctgccttattcatgaaaccagaggattatgaaggcaagttcaaaggctga
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