Mangifera indica (mango): 123194598
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Entry
123194598 CDS
T07684
Name
(RefSeq) protein HEAT STRESS TOLERANT DWD 1 isoform X1
KO
K14848
ribosome assembly protein RRB1
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
minc03009
]
123194598
Ribosome biogenesis [BR:
minc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
123194598
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WDR55
Beta-prop_RIG_2nd
Beta-prop_EIPR1
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
WD40_RFWD3
PALB2_WD40
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
123194598
NCBI-ProteinID:
XP_044463815
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All DBs
Position
13:10882987..10886967
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AA seq
475 aa
AA seq
DB search
MVRSLKNPKKAKRKNKKGSKGDGSSSSSSAPSLPTKVWQPGVDKLEEGEELQCDPTAYNS
LHAFHIGWPCLSFDVVCDTLGLVRNEFPHTVYFVAGTQAEKAAWNSIGVFKVSNISGKRH
DLVPKAAAGDDDMDSESGDSDEDSEDEREGGSGSPTLQLRKVAHQGCVNRIRAMAKNPHI
CASWGDTGHVQVWDFRSHLNALAESEIEASQGASQVFNQTPLVKFGGHKDEGYAIDWNPV
TPGRLATGDCKSYIHLWEPASDSTWNVDPKPFVGHSASVEDLQWSPTESDVFASCSVDGT
IAIWDARVGKSALTSFKAHNADVNVISWNRLASCLLASGSDDGTFSIHDLRLLKGGDSVV
AHFEYHKHPITSIEWSPHEGSTLAVSSSDNQLTIWDLSLEKDEEEEAEFKAKTKEQVNAP
EDLPPQLLFVHQGQKDLKELHWHNQIPGMIVSTAADGFNILMPSNIQSTLPQTVA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcagcctcaagaaccctaaaaaggccaagaggaagaacaagaagggctccaaa
ggagatgggtcatcatcgtcttcttcagcaccgtcattgcctacaaaggtgtggcaacca
ggagttgataagttagaggaaggagaagagcttcagtgtgacccaactgcctacaattcc
cttcacgcctttcacatcggttggccttgtttaagctttgatgtagtgtgtgatacattg
ggtttggtgcggaatgaatttccacacacagtgtattttgttgctgggactcaggcagag
aaagctgcttggaattctattggagtgtttaaagtatctaacatttctgggaaaaggcat
gacttggtgcctaaagctgctgctggagatgacgatatggatagtgaaagtggtgatagt
gatgaagatagtgaagatgagagggaaggtggttcgggttcaccaactttgcagttacgc
aaggttgctcatcaaggatgtgttaatcgcatacgtgccatggcaaaaaatccccatata
tgcgcatcttggggagacactggtcatgtgcaggtatgggattttcgctctcatctaaat
gctttagctgaatcggaaatagaagctagccagggagcttctcaggtttttaatcagact
ccattagttaagtttggggggcacaaggatgagggctatgcgatagattggaatcctgtt
actcctggaagacttgcaactggggactgcaagagttacattcatttatgggagcctgca
tctgattctacctggaatgttgatcctaaaccttttgttggacattctgcaagtgttgaa
gatctacaatggagccctacagaatctgatgtatttgcctcttgttctgtggatggaacc
atagcaatttgggatgcacgtgttggaaagtcagcattaacttcttttaaggcacataac
gcggatgtgaatgtaatctcatggaacaggctggcaagctgtcttttggcatctggaagt
gatgatggaacgttttccattcatgatctaagattgctcaagggaggagattctgttgta
gcacattttgagtaccataaacaccctattacatccattgagtggagtccacatgaaggc
tctactttggcagtttcatcatctgacaatcagttaacgatatgggacctttctttggaa
aaggacgaggaagaggaagcagaattcaaagctaaaacaaaagagcaagtaaatgcccca
gaagatttacctcctcaactactgtttgtgcatcagggacaaaaagacttgaaagagctt
cattggcataatcagatacctggaatgattgtatcaactgcagccgatggttttaacatt
ctgatgccttccaacatacaaagtacccttccacagactgttgcttga
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