KEGG   Mangifera indica (mango): 123194637
Entry
123194637         CDS       T07684                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
minc  Mangifera indica (mango)
Pathway
minc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123194637
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:minc03041]
    123194637
   03036 Chromosome and associated proteins [BR:minc03036]
    123194637
Spliceosome [BR:minc03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    123194637
 Complex B
    123194637
 Complex C
   U2 SnRNP specific factors
    123194637
Chromosome and associated proteins [BR:minc03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    123194637
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_ECM29 HEAT_EF3_N Htt_N-HEAT_1 HEAT_2 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N
Other DBs
NCBI-GeneID: 123194637
NCBI-ProteinID: XP_044463892
LinkDB
Position
13:complement(13192157..13196491)
AA seq 1260 aa
MDTEIAKTQEERRRMEQELASLTSLTYDRDLYGGADRDAYVSSIPVNDDDEANNLDAMDS
EVARKLASYTAPKSLFNEIPRGADDDDSNLGFKKPGKIIDREDEYRRRRLQRVISPERHD
AFAAGEKTPDPSVRTYADVMREQALQREKEETLKAIAKKKKEEEEAAKAEGPKRRNRWDQ
SQDTDAAAAPAKKAKATSDWDLPDATPGIGRWDATPTPGRVSDSTPSVGRRNRWDETPTP
GRVADADATPSGGVTPGATPAGMTWDATPKGLATPTPKRQRSRWDETPATMGSATPMAGA
TPAAAYTPGVTPVGAMDVATPTPSAINLRGSITPEQYNLLRWEKDIEERNRPLTDEELDA
MFPQEGYKILEPPASYVPIRTPARKLLATPTPLGTPLYQIPEENRGQQFDVPKEAPGGLP
FMKPEDYQYFGALLNEDEEEELTPEEQKERKIMKLLLKVKNGTPPQRKTALRQLTDKARE
FGAGPVFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPLLIDE
DYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGIPALL
PFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTIT
ALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDAIYASYY
TKEVMFILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRSDILPEFFRNFWVRRMAL
DRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVANLGASDID
ARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKS
AKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVI
GMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICFELLE
MLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVAETCS
PFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVH
RQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAVEGMRVALGAA
IVLNYCLQGLFHPSRKVREVYWKIYNSLYIGSQDALVAAYPTLEDEQNNIYSRPELLMFI
NT seq 3783 nt   +upstreamnt  +downstreamnt
atggatacagaaatcgcaaagacgcaagaagagcgtagacgaatggagcaagaacttgct
tcacttacctcgttgacttacgatcgcgatctctatggcggtgctgatcgtgatgcttac
gtcagttcgattccagttaacgacgatgacgaagccaacaatctcgacgccatggactcc
gaggttgcacggaaactcgcatcttacacggctcccaagtcgctttttaatgagattcct
cgtggtgctgacgatgatgatagtaatctagggtttaagaaaccgggtaagattattgat
cgtgaagatgagtacagaagacggaggttgcaacgtgtgatttcgccggagcggcacgat
gcgtttgctgctggagagaagactcctgatccgagtgtaaggacttatgctgatgtcatg
agagagcaagcgttgcagagagagaaggaagagactttaaaagcaatcgcgaagaaaaag
aaagaggaggaagaagctgcaaaagctgagggacctaagaggaggaataggtgggatcag
tctcaggatactgatgctgctgctgcgcctgccaaaaaggctaaagctacatcggattgg
gatttacctgatgccacgcccggtatcggtaggtgggatgccactcccacgcctggtaga
gtttctgattctactccttcagtgggcagacgaaatagatgggatgagaccccaacacca
ggacgtgtagcggatgctgatgccactccatctggtggggttactcctggtgccacgcca
gctggaatgacttgggatgccactcctaaaggtttggccactccaacaccaaaacgacaa
cggtcaaggtgggatgagactcctgccaccatgggcagtgccactccaatggctggagcc
acacctgccgctgcttatacaccaggtgtcactcctgtgggagcaatggacgtagcaact
cctaccccaagtgctattaatctgcgcggttctataacacctgagcagtataatttactg
aggtgggagaaggatatagaagaaagaaaccgacccctaactgatgaagagcttgatgct
atgtttccacaagaagggtataagattttggagccacctgcatcttatgtgccaataagg
actcctgcaaggaagctacttgcaacacctacacctcttgggactcccctgtatcaaatt
cccgaagagaatcgtgggcagcagtttgatgtgccaaaggaagcacctggtggattgcca
tttatgaagcctgaggattaccagtattttggggctttattgaacgaggatgaggaagag
gaattgacacccgaggagcagaaagagagaaaaattatgaagctgttattgaaggtgaag
aatggcacccctcctcagaggaagactgccttgagacagcttactgacaaagcaagagag
tttggtgcaggtccggtattcaatcgtattttgcctctacttatgcagcccactttggaa
gatcaggagaggcatcttttggttaaggttattgatagggtgctgtacaagcttgatgag
ttggttaggccttatgttcataagattcttgttgttattgagcctttgttgattgatgag
gattattatgctcgtgttgagggaagagaaattatctctaatctaagtaaggcagcaggt
ttggctactatgattgctgctatgcgtccagatattgacaacattgatgagtatgttagg
aacacaactgctagggcctttagtgttgttgcatctgctcttgggattcctgcactgttg
ccgttcttgaaagctgtgtgtcaaagtaagaaatcctggcaagcacgtcacactgggatc
aagattgtacagcagattgctatcttgattggctgtgctgttcttccacatcttaggtca
cttgtggagattattgaacatggtctgaatgatgagaatcagaaggtgaggacgattact
gctttgtctcttgctgcccttgctgaggctgctgctccatatggtattgaaagctttgac
tctgtcttgaagccattgtggaagggtattaggtcacatcgtggtaaggtattggcagca
tttttgaaggctattggttttatcattcccctgatggatgcaatttatgctagttactat
accaaggaagttatgtttattctgatacgagagttccagtctcctgatgaagaaatgaag
aaaattgtgttgaaagtggtaaagcagtgtgtgagtacagagggtgtagaagctgattat
attcgaagtgatattcttcctgagttctttcggaatttctgggttagaagaatggcttta
gatcggagaaactataagcagcttgtagagacaactgtagagattgcaaataaagtcgga
gttgctgatatagtggggagaattgttgaggatcttaaagatgagagtgaaccttatagg
cgaatggttatggaaacaatcgaaaaggtggttgctaatttgggtgcatctgatattgat
gctaggttggaagagcttcttattgatggcattctttatgccttccaagagcagaccagt
gatgatgccaatgtcatgcttaatggttttggtgcagttgtgaattctcttgggcagagg
gtgaagccataccttccccagatttgtggtaccataaagtggcgcttgaataacaagagt
gccaaggtgaggcagcaggcagcagatcttatttcaaggatagcagtggtgatgaagcag
tgccaagaggagcaactgatgggtcatcttggtgttgtattatacgaatatttgggagaa
gaatatcctgaagttcttggatcaattttgggtgcactcaaggccattgtgaatgttatc
ggtatgacaaaaatgactcctccaattaaggatttacttcctagattgactccaattttg
aagaatagacatgagaaagtccaagaaaactgtattgatcttgttggtcgcattgctgat
cgtggagcagagtttgtgccagctagggagtggatgaggatatgctttgaacttctggag
atgcttaaagcccacaagaagggtattcgacgagccactgtgaacacctttgggtatatt
gctaaagccattgggccgcaagatgtcctggctactctattaaacaatctcaaggtgcag
gaacgtcagaatcgtgtgtgcactactgtggcaatcgcaattgtcgcagaaacttgttcc
ccttttacagttctgccagccctaatgaatgagtaccgtgtgcctgagctcaatgtccag
aatggtgttttgaaatctctctccttcctgtttgagtacattggtgaaatgggcaaggac
tatatctatgcagtgactccgttacttgaggatgccctgatggacagagatttggttcac
aggcagactgccgcatctgctgtcaagcacatggctttgggagttgctggattgggttgt
gaggatgctctggtccacttactgaactatgtctggccaaatatttttgagacttcccct
catgtcataaatgcagtcatggaagccgttgaaggaatgagggttgccttgggtgcagcc
attgtactgaactactgtctgcaggggcttttccatccatctaggaaggttagggaagtt
tactggaagatttacaactcactatatattggctctcaagatgcacttgtggcagcttat
cctacgctggaggatgagcagaataacatatatagtaggcctgagttgctgatgttcatc
tga

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