Mangifera indica (mango): 123194887
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Entry
123194887 CDS
T07684
Name
(RefSeq) WD repeat-containing protein 75 isoform X1
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
minc
Mangifera indica (mango)
Pathway
minc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123194887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
minc03009
]
123194887
Ribosome biogenesis [BR:
minc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
123194887
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
123194887
NCBI-ProteinID:
XP_044464317
LinkDB
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Position
13:complement(5162147..5170798)
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AA seq
820 aa
AA seq
DB search
MIRGGRSQVSSPPAFSNDAKRLLVCTGNTVSIFSTSTGLQITSLEGHTAEVTTVIVEPAA
SKVLCYCWTASLDGSIKYWDFSVPELLKTVDIKLPIFSMVIPSLLGQPTERNEKQHNVFA
YVSVEDTREKTNPRKKKQPKPKPKPLHGRICKCNLTKACLAGGVTLAEMKVPEVITISPS
GKYFGIRKHHKVLIWKVPDVESERVVMRKITLRHTKKMTVLAFHPTQRIVAAGDVTGRIL
IWRRFGDKTFATSERLGDGNMMGGDEERPGVRDNDDADSCTTWHWHPSQVNVLNFSSDGA
YLYSGGKEGVLVVWQLDTGKKKFLPRIGSPLLYFTYSPDPSLSSMSCADNQIHLLKMPSM
EILKSISGIKLACSLPEGYEALCSGIAFDQTAGLVALRTENYCIQFYSLLDDRSISEVQV
CERNYQPGDDVTVVVTLVALSQDSSMMGTAEIKIAEDGIGGLVCLKFWATGSQNKDFSLS
TIIYEPHRDAGISAIAFHPTSQVAVSSSYGGDFKVWVNHDQFQQKDPMLQNSGWSCHAVG
SYKKKAMTAAAFSADGSVLAVAAETLITLWDPDKNVLVAVIGETLTPIMSLSFVGKSENL
VATSRGAKSQLSVWSMSQLSASWSYMLQIEAVASAQDTSSFAALALLPESLRCKGLNGTT
FQGRDGVILLFNATDPVPVASWSVRKAKGGSLAFLQVNPSSIQEYISDGKPPQTLLAYIN
ADHEYVLFDPYGKETHELSVIHRDDLQASEESGQHGYASIYGELPEFQLNKKQAIWTPLA
PTEKPWETIFNGSSHNLPPLTKLCSVFLESLLEKRTGVVE
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgattagaggaggcagaagccaggtttcatcacctccggccttttccaatgacgcgaaa
agactcctcgtttgtaccggcaacaccgtctccatcttcagcacatccactggcttacag
ataacttcgctggagggtcacacggcggaggttacgacggtgattgtggagccggcagcg
agtaaagtattgtgttattgttggacggcgtcgctggatgggagcattaagtattgggat
ttctctgtgccggagttgttgaagactgttgatattaaattacccattttctctatggta
attccatctttgttaggccaacctactgagagaaatgaaaagcaacataatgtttttgct
tatgtgtctgttgaagatacaagagaaaaaacaaatccgcgaaaaaaaaagcaacccaaa
cccaaacccaaacccttgcatggaagaatttgcaagtgtaacttgaccaaggcttgtctg
gctggtggagtaactttagcagagatgaaagtacctgaggttataaccataagtccatca
ggaaaatattttggcatcagaaaacatcacaaggttcttatatggaaggtacctgatgta
gaatctgagcgtgtggtgatgaggaagataaccctgcgtcatacaaagaagatgactgtt
cttgcttttcacccaacacaaagaattgtagctgcaggtgatgtgactggaagaattctg
atttggagacgatttggtgacaaaacatttgctacaagtgaaagactaggagatggaaat
atgatgggcggtgatgaagaaagacctggggtgagggataatgatgatgctgattcttgc
accacatggcattggcacccttctcaagtaaatgttctaaatttctcctctgatggagca
tatttgtattcaggaggaaaggaaggagttcttgtggtttggcagcttgacacagggaag
aagaaatttttgccacgaattggatctcctcttttatattttacatattcgcctgatcct
tcactttcttctatgtcttgtgcagataatcaaattcatctgctaaaaatgccttcaatg
gaaattttgaagtccatttcagggattaagcttgcttgttcactacctgaaggatatgaa
gccttatgtagtgggattgccttcgatcaaactgctggattggttgccttgcgcacagag
aattactgcattcagttttacagtctattggatgaccgtagtatctctgaggttcaagtc
tgtgagagaaactatcaacctggagatgatgtaacggtagtagtgactttagtggctctc
tcccaagacagctctatgatgggtactgcagaaatcaagattgctgaagatggcataggg
ggtcttgtttgtctcaaattttgggccactggatctcaaaataaagacttcagcttgtcc
accattatttatgaacctcatagggatgcaggcatatcagccattgctttccatcctacc
agtcaagtagctgttagctcgtcttatggtggggacttcaaggtttgggtcaaccatgat
cagtttcagcagaaggatcctatgcttcaaaattcaggctggagttgccatgctgtcgga
tcttacaagaaaaaggcaatgacggcagctgcattttcagccgatggttctgttcttgct
gttgcagcagaaactttaattacattatgggacccagataaaaatgtacttgttgctgta
attggagagactctcacgccaattatgagcctgtcgtttgttggaaagtctgagaatctt
gtcgctacatctcggggtgcaaaatcacaactctctgtttggagtatgtcacagctgtct
gcatcttggtcatatatgctccagatagaagctgtagccagtgcacaagacacttcatcc
tttgcagctcttgctcttcttcctgaatcacttaggtgcaaggggttaaatggaacaaca
ttccaaggaagagatggggtaatcttactttttaatgcaacagatcctgttccggtggct
tcctggtctgtgaggaaggcaaagggaggttctcttgcttttcttcaagtaaacccatct
tctatacaagagtatatttcggatgggaaaccacctcaaacattgcttgcctatataaac
gctgatcacgagtatgtcctctttgatccatatggcaaagaaacacatgaacttagcgtg
attcaccgggatgatcttcaggcctctgaagaatcagggcaacatggttatgcatctatt
tatggggaactaccagagttccagttgaataaaaaacaggctatatggaccccattggcc
ccgactgaaaaaccatgggagaccattttcaacggatcatcacataatcttccacctctc
accaaattatgctcagtgtttttagagtcactactggaaaagcggactggtgtcgtggag
tga
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