Mangifera indica (mango): 123194972
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Entry
123194972 CDS
T07684
Name
(RefSeq) elongation factor 1-alpha isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
minc
Mangifera indica (mango)
Pathway
minc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123194972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123194972
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123194972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
123194972
NCBI-ProteinID:
XP_044464417
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Position
13:14119676..14126276
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AA seq
783 aa
AA seq
DB search
MPRKFNYEYDNYDDGYDDCEDYDDYDYDYDVEGNGEATKFKPEASKPGIWRCSICTYDND
DCMSVCDICGVLRTPLVKFSGNGANTSVGGMCQNSGASMMAKSLFASSPHQTPKMTVVGQ
QPKDDVVTGVGDNLHKIGNIKANFHEFHEAFSSHINSKIKIAPFKFDVPSPDDLVSKGLC
SSKMGLKDNLLDMKSSRVSSGVSEKNGTVDKSNAKKSDGAKALVPKDKPKALVPKDKQDS
VDDSKYSKNEEVQVSTRSSESSSTVTSKDRHGNTDDSSHSNDVAVSNSLSDAYSSSGFPT
NIAQPQICPSSTKNSTLSLSSGSSSSVNARRKNSNAQYKPEKWMLPDNAGDRLTQLNLAI
VGHVDSGKSTLSGRLLFLLGRISQKEMHKYEKEAKLQGKGSFAYAWALDESAEERERGIT
MTVAVAYFDSKKYHVVVLDSPGHKDFVPNMISGATQSDAAILVIDASVGSFEVGMDSTKG
QTREHAQLIRSFGIDQLIVAVNKMDSVQYSKDRFESIKLQLGTFLRTCSFKDSSVSWIPL
SAIENQNLVAAPSDVQLSSWYQGPCLLDAIDSLQPPARDFSKPLIMPICDVVKLQRGHVS
ACGKLEAGALRSGMKVLVMPFGDVGTVHALDRDSQACAIARAGDNVGVSLQGIDASHVIA
GGVLCHPDFPVAVSAHLELKVLVLDFAAPILIGSQLEFHIHHAKEAAKIVKMVSLLDTKT
GKVTKKAPRCLTAKQRAVIEVALQGPVCVEEFSNCRALGRVFLRASGRTIAVGIVTRIIE
DQE
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggaaatttaactacgaatatgacaattacgatgacggctacgatgattgtgaa
gattacgatgactatgattacgactatgatgttgagggaaacggcgaagcaaccaagttt
aagccagaagcttcaaagcctgggatttggcgttgctctatttgtacctatgataatgat
gattgcatgtctgtatgtgatatttgtggagttctccgtactcctctggttaaattttct
ggcaacggtgctaatacatcagttgggggcatgtgccaaaattctggagcatctatgatg
gccaagtctctttttgcatcatcaccgcatcagactcccaaaatgactgtagtaggtcaa
cagccgaaagatgatgttgtgactggagtaggcgataacctccacaagattgggaatatc
aaagcaaattttcatgaatttcatgaggcttttagttctcatatcaactctaaaatcaaa
atagccccttttaagtttgatgtcccatcgccagatgatttggtttctaagggtttatgt
tcctccaaaatgggtttgaaagacaatcttctggacatgaaatcttccagagtttcctcc
ggtgtctctgagaaaaatggtactgttgataaatcaaatgctaaaaaatctgatggtgcc
aaagcattagtcccaaaagacaagcccaaagcattagtgccaaaagacaagcaagatagt
gtggatgatagcaaatattcaaagaatgaagaagtacaagtaagcactagaagttcagag
agctcttctactgtaacatcaaaagacagacatggcaatacagatgacagcagtcattct
aatgatgttgcagttagcaacagtttaagtgatgcatatagtagcagtggttttccaact
aatatagctcagccacaaatttgtcccagtagtacaaagaactcgacattgtcccttagc
tctggaagctcatccagtgttaatgctagaagaaagaactcaaatgcacagtataaacct
gaaaaatggatgcttcctgacaatgcaggagatagattgactcagctaaatcttgcaata
gttggccatgttgattcgggaaagtcaacactctcgggtagactcttgtttcttcttgga
cgaatatctcagaaagaaatgcacaaatatgagaaagaagccaaattacagggcaaagga
tcttttgcttatgcctgggcattggatgagagtgctgaagaaagggaacgtggaataacc
atgactgtcgctgttgcatattttgattccaaaaaataccatgttgttgtgcttgactcc
cctggccataaggatttcgttccaaacatgatatctggagcaacacaatctgatgctgcc
attcttgttatagatgcctcagtaggctcgtttgaagtgggtatggatagtacaaaagga
cagacgagggagcatgcacaactcatcagaagttttggtattgatcaacttatagttgca
gtcaacaaaatggattctgtgcaatattccaaagatcgatttgaatcaataaaactacaa
cttggaacatttcttcgtacttgtagttttaaggattcctctgtgtcatggattccattg
agtgccattgaaaatcaaaatttggtggctgctccttctgatgttcagctatcttcttgg
tatcaagggccctgtcttttggatgcaattgattctttacaacctcctgctagagatttt
tcaaagcctctaattatgcccatttgcgatgttgttaaattacagcgtgggcatgtgtct
gcctgtggtaaattggaggctggagctcttcgaagtggaatgaaggtcttagtcatgcca
tttggagatgtaggcactgtgcatgccctagatcgtgactctcaggcttgtgctattgca
agagctggagacaatgtaggtgtcagtctgcaaggtatcgatgcaagccatgtgattgct
ggaggtgtgttatgtcaccctgatttccctgttgcagtttcagcacatttggagctgaag
gtgcttgttttggatttcgcagcccccattttaattggttctcagttggaatttcatata
caccatgcaaaggaggctgcaaaaattgtaaaaatggtgtcattacttgacacaaagact
ggaaaagttacaaaaaaagcaccccgctgtcttactgcaaagcagagagctgtaattgag
gtagccttgcaaggaccagtctgtgtggaggaattctcaaactgtagagctctcggtagg
gtgtttctaagagcttcagggagaactattgctgtaggcattgtaacccgtataattgag
gatcaggaatag
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