Mangifera indica (mango): 123195434
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Entry
123195434 CDS
T07684
Name
(RefSeq) protein argonaute 16 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123195434
03036 Chromosome and associated proteins [BR:
minc03036
]
123195434
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123195434
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
123195434
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
123195434
microRNA pathway
RISC loading complex
123195434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Sensor_TM1
Motif
Other DBs
NCBI-GeneID:
123195434
NCBI-ProteinID:
XP_044465051
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All DBs
Position
14:complement(5984637..5992834)
Genome browser
AA seq
986 aa
AA seq
DB search
MIRRVHQMKIVQHSTQQQSIFPRTLVLFNTLSLHFLFSVFFYSSLFRQRVFCSRLSLIFL
LSETLEIGQRRSLSRPYQNMEKAGGLEGVDQSSPLPLPPVVPPNLKPELVDLPKRSIISR
HGVGNCGRRITLLTNHFKVSVNASDAIFYQYTVTISMEDRKITESKNIGRRLLDQLYQTY
SSELAGKRFAYDGEKSLYTVGPLPQNKFEFTVILEESRAKHESGSPNGGSPVGTCKRSKQ
CFQSKTFKVEISYAAKIPLKSIAIALKGNEVDNNAQDALRVLDIVLRQQAANRGCLLVRQ
SFFHDDSRNFVDVGEGVTGIRGYHSSFRPTQGGLSLNMDVSTTMILKPGPVIDFLIANQN
VREPRDIDWARAKKMLKNLRIKTRHRNMEFKIIGLSEKPCNQQFFIGISSFPMKVKNASN
EGHTVEITVNEYFAKYCGIELTFSAYLPCLDVGKPKRPNYLPLELCSLVSLQRYTKSLSP
MQRASLVEKSRQKPQERMQTLTAAMQTYCYDEDPVLGACGISIEKQLTRIDGRVLEAPKL
KVGHNEDCVPRNGRWNFNNKSFLDPIKIDRWIVVNFSARCDTSHLSRELINCGRKKGVHI
ERPFTLIEEDQQSRRTSPVVRVDKMFDQITAKLPEPPQLILCVLPERKNSDIYGPWKRRC
LSDFGIVTQCISPSRINDQYLTNVLLKINSKLGGINSLLAIEHPSHIPLIKDTPTLILGM
DVSHGSPGRSDIPSIAAVVGSQRWPLISRYRASVRTQSPKVEMIDALYKPLANGKDDGII
RELLVDFYKTSNKRKPKHIILFRDGVSESQFNQVLNIELEQIIKAYQHLGEVDVPKFTVI
VAQKNHHTKLFQASAPENVPPGTVVDTKIVHPRNYDFYMCAHAGMIGTSRPAHYHVLLDE
IGFSPDNLQNLIHSLSYVYQRSTTAISIVAPILYAHLAAQQMGQFIKFEDLSETSSGQRS
ITSAGSIPVPELPRLHEAVEGSMFFC
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggagagtccatcaaatgaaaattgttcagcatagtacacagcagcaatccata
ttcccccgcacactagtcctatttaacactctttccctccacttcctcttctcggttttt
ttctactcgtctctctttcggcagcgagtcttttgttctcgtctttctctgattttccta
ctctcggaaaccctagaaatcggtcaaagacgaagtctctctcgtccttaccagaatatg
gagaaagcaggaggtcttgagggagtggatcaatcctcacctttgcccctacccccagtt
gtacctccaaatttaaaaccagagctggtggaccttcccaaacgttctatcattagtagg
catggggttggtaattgtggacgccgcataacgttgcttacaaatcactttaaagtttca
gtcaatgcatcagatgcaatattttaccagtacactgtcactatttctatggaggatagg
aaaattactgagagcaagaacattggaagaagactgcttgatcagctttaccaaacatac
tcttctgaacttgctggtaaaaggtttgcatatgatggtgaaaaaagtttgtacactgtg
ggtcctcttccgcagaacaagtttgagtttacagtgattcttgaagagtcacgagcgaaa
catgaaagtggcagccccaatggtggcagtcctgtaggtacttgtaagcgatcaaaacaa
tgtttccagtcaaaaactttcaaagttgaaataagctatgccgctaaaatacctttgaag
tctatagctatcgccctcaagggtaatgaggtagataataatgctcaggatgcattgaga
gtgcttgatattgtactaaggcagcaagcagctaacagggggtgtcttttggtgaggcag
tcattctttcatgatgattctaggaactttgttgatgttggggaaggtgttactggtatc
agggggtatcattctagcttccgtcccactcagggtggcttatctcttaacatggatgta
tctacaacaatgatccttaaacccggccctgtgattgattttttgatagctaaccagaat
gtacgagaacctcgtgatattgactgggcaagggccaagaagatgctcaaaaacttgagg
attaagacaaggcaccgcaacatggaatttaaaatcataggtctaagtgagaagccatgc
aatcagcagtttttcatcggcatttctagttttcctatgaaagttaaaaatgcttcaaat
gaagggcacactgtggagattactgtcaacgaatattttgctaaatactgtggcatagag
ctcaccttttctgcatacctgccatgtcttgatgttgggaaaccgaaacgaccaaattat
ctaccgctggagctttgttctcttgtttcactccaacgctatactaaatcactatcgcca
atgcaacgagcatccttggttgaaaagtcaaggcagaagcctcaagagagaatgcaaact
ctaactgctgctatgcaaacctactgttatgatgaggaccctgttcttggagcatgtgga
atttctattgaaaaacaactgacacgtattgatggtcgtgtccttgaggccccaaagctg
aaggttggtcacaatgaggactgtgtccctcgtaatggacgctggaactttaacaacaag
agctttttagaccctatcaaaattgatcgttggattgttgtcaacttttctgcccgctgt
gatactagtcacctatctcgtgagcttatcaattgtggaaggaagaagggtgttcatatt
gaacgtccttttaccttaattgaggaggatcagcaatctagaagaaccagtcctgttgtt
agagttgataaaatgtttgatcaaattacagcaaagcttccagaacctccacagttgatt
ctctgtgtcttgcctgagaggaaaaattctgacatttatggaccttggaagaggagatgt
ctcagtgattttggaattgttacccaatgcatatctccttctcggattaatgatcaatat
cttacaaatgtactacttaaaatcaattcgaagcttggaggaataaattctttgttggca
atagaacacccctcacacatacccctgataaaagatactcctaccttaattttgggtatg
gatgtctctcacggatctcctggtcgatcagatatcccatctattgctgcggttgttggc
tctcaaaggtggccactgatttcaaggtatagagcatcagtaagaactcaatctcccaag
gtggagatgattgatgctctatacaaacctctagcaaatgggaaagatgatggtatcatc
agggaactgcttgtggatttctacaaaacgagcaataaaagaaaacctaaacatattatt
ctgttcagggatggagtgagtgaatcacaattcaatcaagttttgaatattgagctggag
caaatcataaaggcataccagcatcttggtgaggttgacgttcccaagttcacagttatt
gttgcacagaaaaatcaccacaccaagctattccaagctagtgcacctgaaaatgttcct
cctggaacagttgtggacacaaaaattgtgcatccaaggaactatgacttctacatgtgt
gcacatgctgggatgataggaacttcaaggccagcacactaccatgtattgcttgatgag
attggtttctctcctgataacttgcaaaatcttatccactccttgtcatatgtttaccaa
aggagtactacagccatttcaatagtggcaccaatattgtatgctcaccttgctgcacaa
cagatggggcagtttattaagtttgaggatttgtcagaaacttcttcaggacaaagaagc
attacatctgccgggagtattcctgttcctgagctgcctaggttgcatgaggcagttgag
ggttcgatgttcttctgctaa
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