Mangifera indica (mango): 123195569
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Entry
123195569 CDS
T07684
Name
(RefSeq) pectate lyase 1-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
minc
Mangifera indica (mango)
Pathway
minc00040
Pentose and glucuronate interconversions
minc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123195569
Enzymes [BR:
minc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
123195569
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
DUF5123
Motif
Other DBs
NCBI-GeneID:
123195569
NCBI-ProteinID:
XP_044465290
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All DBs
Position
14:928689..930399
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AA seq
315 aa
AA seq
DB search
MIDNVGEDMIYYIVTSSNDDPLNPKPGTLRYGATLISQKVWITFQRDMHIKLRKPLLISS
FTTIDARGSRIHISGIGCLLIYEANNVIIHGLYIHHCQPAGSGAVIGPNSKILNLGAIDS
DAIRLVAASKIWIDHNTLYKCQDGLIDVTLSSTDITISNNWFKNQDKVMLLGHDDMHASD
KNMKVTVVFNHFGPNCNQRIPRVRYGFVHIANNLYQEWTSYAIGGSMNPQIRSEANLYIA
KKSGQKEVTWQLGRSSKLYSVGDIFENGASFKATGSGNIQPNYNDEQRFQVADANSVRAL
TNASGVLLCSRALKC
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgattgacaatgttggtgaggatatgatctattacatagtcacgagttctaatgatgat
ccgttaaaccctaaacctggaaccttgagatacggagccactttaatctctcaaaaagtg
tggatcacttttcaaagagatatgcatattaaacttaggaaaccgcttctgataagtagt
tttaccaccattgatgctcgtggttcacgtattcatatctcaggcattggatgtctcttg
atctacgaagcaaataatgtcatcattcacggattatacatccaccattgccagccagca
ggatcaggcgcagttattggtccaaactcaaagattcttaatttgggagcaatagatagc
gatgcaatcaggttggtggcagcatcaaagatttggatcgatcacaatacattatataaa
tgtcaagatggtctaattgatgtcactttaagctcgacggatattacaatctccaacaat
tggttcaaaaatcaagataaagttatgcttcttgggcacgatgacatgcatgcaagtgac
aaaaacatgaaagtcacagtagtattcaatcattttggacctaattgtaatcaacgaata
ccacgggtgagatatggatttgttcatatagctaataacctataccaagaatggacgagc
tatgctattggggggagcatgaaccctcaaattagaagtgaagccaacttgtatatcgcc
aaaaaatcagggcaaaaggaggtgacatggcagttaggaaggtcgtcgaaactttattca
gtgggggatatttttgaaaacggtgcttcttttaaagcaacaggttctggaaatatacag
ccgaattacaacgatgaacagagatttcaagttgcagacgcaaattctgtacgggcattg
acaaatgcatcaggcgttttactctgctcgcgggcactaaaatgctga
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