Mangifera indica (mango): 123195926
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Entry
123195926 CDS
T07684
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
minc03009
]
123195926
Ribosome biogenesis [BR:
minc03009
]
Eukaryotic type
90S particles
Other 90S particles
123195926
Pre-60S particles
Other pre-60S particles
123195926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_EIPR1
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
WD_LRWD1
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_2nd
WDR54
Motif
Other DBs
NCBI-GeneID:
123195926
NCBI-ProteinID:
XP_044465728
LinkDB
All DBs
Position
1:complement(20718588..20726243)
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AA seq
500 aa
AA seq
DB search
MIAAVSWVPKGASKAVPDEAQLPPKEEIEKMIKSGALEEESENGHSEEEDEDTDIEDVEH
TNEVTQALVVADALGKTSKSKNSGTKLDDIAEGLKELDMDNYDDEDEEVELFSKGLGDLY
YPSNQMDPYLKDKDDVDSEDLEDMVINANDSVIVCACNEDDVSHLEVYVFEESNDGDTNL
YVHHHIIIPAFPLCMAWLDCPLKGGEKGNFMAVGSMDPSIEIWDLDVIEEVQPCLILGGI
NEEKNMKRKKNKKGKKSSTEYKEGSHTDSVLGLAWNKEFRNILASASADKTVKIWDVVEG
KCSFTLGHHTDKVQAVAWNHYAPQVLLSGSFDRSVFMKDARISTHSGFKWSVAADVESLA
WDPHTEHSFVVSLEDGTVKGFDIRTAKSDQASESQPCFTLHAHDKAVCSISYNPLVTNLL
ATGSIDKMVKLWDLSNNQPSCVGSRNPKAGGIFSVSFSEDSPFLLAIGGSKGNLEVWDTS
SVAEVSKRFGKYSKPNKADI
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgatagcggcagtatcatgggtgccaaagggggcatcaaaggctgtgcctgatgaagct
caacttcccccaaaggaagaaattgagaagatgataaaaagtggcgctttagaagaggaa
agtgagaatggtcatagtgaagaggaggatgaagatacagatattgaggatgttgaacac
actaatgaagtcacacaagctttagttgtagcagatgcacttggcaaaacttccaaaagc
aagaattcaggaaccaaattggatgatatagctgagggcttgaaggaacttgacatggac
aactacgatgatgaggatgaagaagttgagctatttagcaaggggctcggtgacctttac
tacccaagtaatcaaatggatccatatctgaaggacaaagatgatgtggactctgaagac
cttgaggatatggtcattaatgcgaatgattcagttatagtttgtgcatgtaatgaggat
gatgtcagtcatctggaggtctatgtctttgaggaatcaaatgatggtgacacaaactta
tatgttcaccatcatatcatcattccggcatttcctctttgcatggcttggcttgattgc
ccacttaaaggaggagaaaaagggaattttatggctgttggctctatggacccttccatt
gaaatatgggaccttgatgttatcgaagaagtacaaccatgtctcatcctaggtggcatt
aatgaggagaagaatatgaagaggaagaagaacaagaaaggcaaaaagtcatccactgaa
tacaaagaaggcagtcacactgattcagttctaggtcttgcttggaacaaggagttcagg
aatatcctagctagtgcaagtgctgacaaaactgttaagatttgggatgtggttgaagga
aaatgtagttttaccttggggcaccatacagataaggttcaagctgttgcgtggaatcat
tatgctccccaagttcttcttagtggatcttttgatcgctcagttttcatgaaggatgca
aggatatctacgcattctggtttcaagtggtcagttgcagctgatgtagaaagcttggca
tgggatccacacactgagcattcatttgtggtgagtcttgaagatggtacagtgaaaggg
tttgatatccgaactgccaaatcagatcaagcttcagagtcacagccatgttttaccctg
catgcacatgacaaggctgtttgtagcatttcctataatccattagtaaccaatcttctt
gcgactggatccatagataaaatggtgaaactttgggatctgtcaaacaaccaaccttca
tgtgttggatccaggaaccctaaggcaggaggtattttttcagtttccttctcagaggat
agtccatttttgctggcgattggaggatccaaaggaaatttggaggtatgggatacttca
tctgttgccgaggtgtcgaaaaggtttggcaaatacagcaagcctaacaaagccgatata
tga
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