Mangifera indica (mango): 123196035
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Entry
123196035 CDS
T07684
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit E-like isoform X1
KO
K07466
replication factor A1
Organism
minc
Mangifera indica (mango)
Pathway
minc03030
DNA replication
minc03420
Nucleotide excision repair
minc03430
Mismatch repair
minc03440
Homologous recombination
minc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123196035
03420 Nucleotide excision repair
123196035
03430 Mismatch repair
123196035
03440 Homologous recombination
123196035
03460 Fanconi anemia pathway
123196035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
minc03000
]
123196035
03032 DNA replication proteins [BR:
minc03032
]
123196035
03400 DNA repair and recombination proteins [BR:
minc03400
]
123196035
Transcription factors [BR:
minc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123196035
DNA replication proteins [BR:
minc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
123196035
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
123196035
MMR (mismatch excision repair)
123196035
DSBR (double strand breaks repair)
HR (homologous recombination)
123196035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF936
zf-CCHC
RADX
DUF223
CDC24_OB3
POT1
zf-CCHC_3
BRCA-2_OB1
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
123196035
NCBI-ProteinID:
XP_044465853
LinkDB
All DBs
Position
14:complement(2631430..2634840)
Genome browser
AA seq
903 aa
AA seq
DB search
MAINLTEGAIELICKGDVTSDSHLMPVLQVMDLKLVVSKQQQQQQHQRFRMVLSDGSLSQ
QGMLATQRNELVNSGQLQIGSVVRLTKFTCNVIQNRMIVIVMDLEVIMQNCELIGKPVPA
QRPSAPAQMSNDQSRTVSGNPQHHGGSSLAGGPVDKSNVSATGNPQQYGGSSLASGPIDK
SYVSGTFPQQASVRMNQLSGASYSSNSDPARYVTTNETLSYSKPESGARFSARSGTFNNP
NMSFGDSRPELSRSYQSNYARTPQPPYMQPPAMYMNRGQVAKSETILRIIPIGALNPYQG
KWTIKARVTSKGELRHYNNQRGDGKVFHFDLLDSDGGEIRATCFNAVADQFYHQVEAGKV
YLISRGTLKPAQKTFNHLHNDLEIFLDTTSMVQLCADDDNSIPQQQFHFCSISDIEVMEN
NSIVDVIGVVSFISPAASIMRKNGTETYRRTLHLKDMSGRSVELTLWGTFCNDDGQRLQE
MCDSGVFPVLAVKSARVNDFNGKSVGTILSSQLFIEPDFPEAQKLRQWFDKEGKNIQSVS
ISRETLSVVRSDVRKTISQIKDEGLGTKEKPDWITVNATVVYIKFDNFCYTACPIMNGDR
PCNKKVTNNGDGRWHCERCDQSVAECDYRYILQFQIQDHTGLTWVTAFQECGEEILGISA
KDLYYLKYVDQNEEKFSEAIRNATFSKFIFKLKVKEETFSDEQRVKSTVVKVERYNHISD
TRFLIDLVAKLKSGDSSAFNSKAESSVPNSGMSIREAESIGNRQPASAVPNYVETNSNAG
RDFGLMANQMGQYGNRYSGSRLAAAGTPMQECCSSCGAAGHSFTNCPSIMSGPGQSMTGG
YSNSVSPGVGGGASDECYKCHKFGHWAKDCPGLNTAPPAYGSSRSGISPGSYGNASRQKV
GGF
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggcgataaatttgacggagggcgcaatagagttgatatgcaagggtgatgtcacgtcg
gacagccatttgatgcctgtgcttcaagtgatggatttaaagcttgttgtttctaagcag
caacagcaacagcaacatcagagattcagaatggtgctatctgatgggtcgctgagtcaa
caaggcatgcttgctactcagaggaacgagttagtcaattccgggcaattgcagattggc
tccgttgttagattgaccaaattcacttgtaacgttatccaaaaccgcatgattgttatt
gttatggatttggaggtgataatgcaaaattgtgagctaattggaaaacctgtacctgca
caaagaccttctgcacccgcgcaaatgtccaatgatcaatcgaggacagtttctgggaat
cctcaacatcatggtggaagttcacttgctggtgggccggttgataaatcaaatgtaagt
gctacagggaatcctcaacagtatggtggaagctcacttgccagtgggcctattgataaa
tcatatgtaagcggtacattcccacaacaagctagtgtgagaatgaatcaattatcaggt
gcttcgtattccagcaattctgatcctgcaagatatgttacaacaaatgaaacactcagt
tattctaaaccagagtctggtgctagattttctgctcggtcaggaacatttaacaatccg
aacatgagttttggtgactctaggcctgaactttcccgatcttatcaaagcaattatgct
cgtacgccccaaccaccctatatgcagccacctgctatgtatatgaacagaggacaagtg
gctaaaagtgaaacaattctcaggataattcccataggtgcccttaatccctaccagggc
aagtggacaatcaaggctcgtgtaacatccaagggagaacttaggcactataacaatcaa
cgtggtgatggtaaagttttccattttgatcttcttgactctgatggtggagaaatcagg
gcaacctgctttaatgcagtggcagaccaattttaccaccaagttgaagcaggtaaagtt
tatttgatctctaggggaactttgaaacctgcccaaaagaccttcaaccaccttcataat
gatcttgaaatttttcttgatactacatcaatggtacagctgtgcgcggacgatgacaat
tcaattccacaacagcagtttcatttctgttcgataagtgatatcgaagtcatggagaac
aactcaattgtggatgttattggtgtagtctcatttattagtccagctgcttcaataatg
agaaaaaatggtactgaaacttacaggagaaccctccatttgaaagacatgtctgggcga
agtgttgaattaaccctatggggaaccttctgtaatgatgatgggcaaaggctgcaagaa
atgtgtgattctggggtctttccagttcttgctgtgaaatcggccagggtcaatgatttt
aatgggaaatcagtggggactattctgtcaagtcagctgtttatagaacctgactttccc
gaggctcagaagttaaggcaatggtttgacaaggaggggaagaatatccagtcagtctcc
atttccagggaaacattgagtgtggttaggtcggatgtccgaaagactatatctcaaatt
aaagatgagggtctagggacaaaggagaagccagattggatcactgtcaatgcaactgtt
gtatacataaaatttgacaatttttgttacacagcttgtcctatcatgaatggggatcga
ccatgcaacaaaaaggtcacaaataatggagatgggaggtggcattgtgagaggtgtgac
cagtctgttgctgaatgcgactataggtatatactccagttccagatacaggatcatact
ggcttaacatgggtaactgcatttcaggagtgtggggaggagatcctgggcatatctgca
aaagatttgtactacttgaaatatgttgatcaaaatgaagagaaattttcagaagccatt
cgtaatgctaccttttccaaatttatattcaagttgaaagtgaaggaggaaacattcagt
gatgaacagcgtgtaaagtcaacagtggtcaaggtggaaaggtataatcatatatctgat
accaggtttcttattgatttggtggctaaacttaaatcaggagattcaagtgcttttaac
tcaaaggcagaaagttcagttcctaattctgggatgagtattagagaagctgagagtatt
ggaaacagacaacctgcatcagcagttccaaactatgtggagactaacagcaatgctggt
agagattttgggttaatggccaatcaaatgggtcagtatggaaaccggtacagtggttca
aggcttgctgcagctggcactcccatgcaggaatgctgtagcagctgcggggctgctggt
catagctttacaaattgcccgagcataatgagtgggcctggacagtccatgacaggaggc
tattccaactcggtatctcccggagtaggtggtggtgcatctgatgaatgctataaatgc
cacaaatttggacattgggcaaaagactgtcctggactgaatacagctcctcctgcttat
ggaagcagccgcagtggcatttccccgggaagttacgggaatgcctcaaggcaaaaagtt
ggtggcttttga
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integrated database retrieval system
