Mangifera indica (mango): 123196378
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Entry
123196378 CDS
T07684
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
minc
Mangifera indica (mango)
Pathway
minc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123196378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123196378
03016 Transfer RNA biogenesis [BR:
minc03016
]
123196378
Enzymes [BR:
minc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
123196378
Messenger RNA biogenesis [BR:
minc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
123196378
Transfer RNA biogenesis [BR:
minc03016
]
Prokaryotic type
tRNA degradation factors
123196378
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
OB_PDCD11
KH_PNO1_2nd
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
123196378
NCBI-ProteinID:
XP_044466312
LinkDB
All DBs
Position
14:3219438..3227621
Genome browser
AA seq
949 aa
AA seq
DB search
MSSLATKSHPLLTSLPSFLTWRALGFRTICSGRLGFASSDPEQDPPVAGTKVLETFKEEF
EIGSRLITLETGKIARFANGAVVLGMDETKVLSTVTSGKGDAVRDFLPLTVDYQEKRYAQ
GMIPTTFMRREGAPKERELLCGRLIDRPIRPLFPAGFYHEVQVMASVLSSDGKQDPDVMA
ANATSAALMLSDIPWGGPIGVIRIGRIAGQFIVNPTMDELNLSDLNLVYACTKDKTLMID
VQAREISEKDLEASLRLAHPEAAKYLEPQIRLAAKVGKHKKEYKLSMISDRTLEKVSNLA
AVPIEAVFTDPSYGKFERGEALENIAQEVRKVLEEECDEECLKVLPKAVDTVRKKVVRKR
IITEGFRVDGRHLNEVRPIYCEAGNLPILHGSALFSRGDTQVLCTVTLGAPEDAQRLDSL
VGPPTKRFMLHYSFPPFSINEVGKRVGLNRREVGHGTLAEKALLAVLPPEDDFPYTVRVN
SEVMASDGSTSMATVCGGSMALMDAGIPVREHVAGVSVGLVSEIDPSTGEFKDYRILTDI
LGLEDHLGDMDFKIAGTRKGVTAIQLDIKPAGIPLDIICECLEHALKGRLQILDHMEQQI
SAARTQDDRNSPRLVTLKYSNDTLRRLIGPLGSLKRKIEEETGARISISDGKLTIVARNQ
EMLEKVREKVDFIIGREIEVGGVYKGVVTSVKEYGAFVEFNGGQQGLLHISELSHEPVSR
VSDVVTVGQKLALMCIGQDVRGNIKLSLKAALSKPGAEAKKAVEGCAPGDKEATNVWASV
GNASDGQNLEFPTIKSETAETNSYSSSTPAIVIRSAAECEEEEKTSGLSQSSRSRSKSTV
ASEGDSKSKKSMPLVDGIDSGKHDGKSDMESKVETLVSTRNLKLGTIVTAKVYQIRARGL
VLDLGGGIRGMYRFEANGKEEFKIGDEMLVKCSSFTGKGIPVMSSVNEE
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcattggccaccaaatcccacccgcttctgacttctctaccgagcttccttaca
tggcgagcccttggcttccgcaccatctgcagcggtcgccttggcttcgcctcctccgac
cccgaacaagacccgcctgtggcgggcaccaaggttctagaaactttcaaagaggagttc
gagattggatcacgcttaatcacccttgagactggcaaaattgcccgcttcgcaaatgga
gctgtcgttttgggcatggatgagaccaaggttttgtccaccgttacctccggtaaagga
gatgcagttcgcgattttttgcctctcactgttgattatcaagagaaacgatatgcccaa
ggtatgattccaactactttcatgcggagggaaggtgctcctaaagaaagagaactttta
tgtggtcgtctcattgatagaccaatacgaccactctttcctgcaggattttaccatgaa
gtccaggtaatggcaagtgtactttcttctgatgggaaacaggatcctgatgtaatggca
gctaatgcaacatctgctgctcttatgttatcagacattccttggggtggtcccattgga
gttatccgtattgggagaattgctggacagtttattgtcaacccaaccatggatgagctt
aacttgagtgatctcaacttagtatatgcctgtacaaaggacaaaactttgatgatagat
gtgcaggcacgtgagatctcagagaaagatcttgaagctagtttgagactggctcatcct
gaggcggccaaataccttgaacctcaaatcaggctggctgcgaaagtaggaaaacataag
aaagaatataaactgtcaatgatctcagatagaactttggagaaagtcagtaaccttgct
gcagtgcctattgaagctgtttttactgatccatcatatggcaagtttgaacgtggagag
gctttagaaaatattgcacaagaagtgagaaaagtccttgaagaagaatgtgatgaagaa
tgcttaaaggtcctaccaaaggcagtagacactgtgaggaaaaaggttgtccgcaaaagg
attattacagaaggcttccgggttgatgggagacatcttaatgaagttaggcctatttat
tgtgaagctggtaatttaccaatattgcatggatcagcacttttttctcggggagatacc
caggttctttgtactgtgacacttggagcacctgaagatgctcaacgcttggactccttg
gttggccccccgacaaagcgattcatgcttcactacagttttccaccattttcaatcaat
gaagttggtaaacgagttggcctaaatagacgtgaagttggtcatggaactcttgcagag
aaagctctgcttgctgtgttgcctcctgaagatgattttccatatactgtccgtgtgaat
tcagaggtcatggcctctgatggttcaacatccatggcaactgtctgcggaggcagtatg
gctttgatggatgctggtattccagtaagagaacatgtagctggtgtttcggttggtctt
gtcagtgaaatcgacccatcaactggtgaatttaaggattaccgtatattgactgatata
ttgggtctagaagatcatttaggagacatggacttcaaaattgctggcactcgaaaagga
gttacagcaattcagttggatataaaacctgctggaattcctttagatattatttgtgag
tgtttagagcatgcacttaaaggtcgtcttcaaatccttgatcacatggaacagcaaatt
agtgcggcacggactcaagatgatagaaattcacctcgtctagttaccttgaagtacagc
aatgacactcttcgccgcttgattggccctctaggttctctcaaaagaaaaattgaagag
gaaacaggtgcacggatctctataagtgacggaaagcttactatagttgctaggaatcag
gagatgctggaaaaagtacgagaaaaggttgacttcataattggccgtgaaatcgaggtt
gggggtgtctataagggtgttgtaacatcagtcaaagaatatggtgcctttgtggagttc
aatggtggccaacaaggcctgctacacatttctgagttgtcgcatgaaccggtttcccga
gtttcagatgtggtgactgtcggccagaagcttgctttgatgtgcatagggcaagatgtt
cgtggtaatattaagctatcccttaaagcagctctatctaaacctggagctgaggcaaag
aaagctgttgaaggatgtgctcctggcgacaaagaagctactaatgtttgggcatcagtt
ggaaatgcatctgatgggcaaaatctggagttcccaacgatcaaaagtgaaactgctgag
acaaactcatattcttcctcaacccctgcaatagtgattcgaagtgctgcagagtgtgag
gaggaggaaaaaacttctggtttgagtcagagttctaggagtagatctaaatcaactgtt
gcttcagaaggggatagtaaatcaaaaaaatctatgcctctagttgacgggattgattct
ggtaaacatgatggcaagagtgatatggaaagcaaagttgagactcttgtttctacaaga
aatttgaagcttggaacaattgttactgccaaggtttatcaaattcgtgctcgtgggtta
gttcttgatttgggtggtggaattcgtggaatgtatcggtttgaggcaaatggcaaggaa
gagttcaagataggtgatgaaatgctagtcaagtgttcaagttttactggcaaggggatt
ccagtcatgtcttcagtcaatgaggaataa
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