Mangifera indica (mango): 123196576
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Entry
123196576 CDS
T07684
Name
(RefSeq) cell differentiation protein rcd1-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
minc
Mangifera indica (mango)
Pathway
minc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123196576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123196576
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123196576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
123196576
NCBI-ProteinID:
XP_044466564
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Position
14:complement(6232890..6237271)
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AA seq
311 aa
AA seq
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MANLPESIWGDSPSVAGPNKSTAANAERLAALEQWIKALQSHETRERALIVLSKVRENRE
DLAPLLWDSFGTVTLLLQEIISVYVLLSSSNLTERVSNRVSNALALFQCIASHPDTRKKF
LKAQLPQYLYPFLNIKNKEKAYEYLRLASLGVIGALVKSNDPEAVLFLLDTQAFPSCLVS
MEVGTELSKTVATFIVHKILLDDEGLKYCCTFAERFFAVARLLRQMIEKFAEEPSKRLLK
LIIGCYLRLSENPRACDGLRCCFPLSLTDSTFFGLLQGDPNTMECLRKLINNVSVRQRPV
ALEESHVRIRG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacttaccagaatcgatatggggagactcaccatcagtggcgggtccaaacaag
tctactgccgctaatgctgaaagattggcagcgttggagcagtggattaaggctctccaa
tcccatgaaacccgagaacgtgctctcattgtcctttctaaggttagagaaaatcgtgaa
gatttggcgccattgttatgggactcgtttggcacagttactttgctgttacaggaaata
atatcggtatacgttttgctatcttcttcaaatcttacagagagagtatcaaacagggta
tctaatgcccttgctttatttcagtgtatagcttcccacccagatacaagaaagaagttt
ctcaaggctcaattgccgcagtatttgtacccctttctgaacattaagaacaaagaaaag
gcttatgaatatctgaggcttgccagcttaggtgtgatcggtgccttggtgaagtccaat
gatccagaagctgttcttttccttcttgacactcaagcatttcctagttgcctggtcagc
atggaggtgggcactgagctatcaaaaacagttgccacctttattgttcataaaatctta
ctggatgatgagggtttgaagtattgctgcacttttgcggaaaggttttttgcagtggct
cgtcttttgaggcaaatgattgaaaaatttgcagaagaaccctccaaacggctgctaaaa
cttattattggttgttatcttagactctcagaaaatccaagagcatgcgatggactaaga
tgctgttttcctctaagtttaacagacagtaccttctttggcctcctacaaggtgacccc
aataccatggaatgccttagaaaattgatcaacaatgtctctgtcagacaacgaccagta
gctcttgaggaatcacatgttcgcatcagaggctag
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