KEGG   Mangifera indica (mango): 123196769
Entry
123196769         CDS       T07684                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1-like
  KO
K14962  COMPASS component SWD2
Organism
minc  Mangifera indica (mango)
Pathway
minc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    123196769
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:minc03019]
    123196769
   03036 Chromosome and associated proteins [BR:minc03036]
    123196769
Messenger RNA biogenesis [BR:minc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     123196769
Chromosome and associated proteins [BR:minc03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     123196769
    COMPASS/SET1 complex (yeast)
     123196769
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_NUP159_NUP214 eIF2A NBCH_WD40 PQQ_3 Beta-prop_SCAP Beta-prop_WDR35_TULP_N PQQ_2 Ge1_WD40
Other DBs
NCBI-GeneID: 123196769
NCBI-ProteinID: XP_044466822
LinkDB
Position
14:3278993..3283093
AA seq 409 aa
ISWVGNSPLAYFITKTFFLQNRVKSLESAFFCFRRRCSPSTVLCNCDIATDSTNGYRSSR
CSFFSYQNLSMVNTVLTELDDKIVRSMAVGAVFSDFGGKINSLDFHRKDDLLVTASEDES
VRLYDIVNAKLLKTTYHKKHGTDRICFTHHPSSVICSTKSNLDSTGESLRYLSMYDNRIL
RYFKGHKERVVSLCMSPVNDCFMSGSLDHSVRMWDLRVNACQGILHLRGRPTVAYDQQGL
VFAVAMEGGAIKLFDSRSYDKGPFDTFLVGGDRAEVCDIKFSNDGKSMLLTTTNNNVYVL
DAYGGEKRFAVNLEPSPNETIEATFSPDGQYVVSGSGDGTIHAWDINSRNEVACWNAHTG
VSSCLKWAPRRVMFVAASSVLSFWIPNAHDPASGEPQSQQISHSTPSLS
NT seq 1230 nt   +upstreamnt  +downstreamnt
atatcttgggtgggaaacagtcctttggcctactttattaccaaaacgttctttctacaa
aacagagtgaagagtctggaatcggcgttcttttgtttccgccggcgttgctctccttca
actgtgctttgtaattgtgatatcgctactgactccaccaacggttatcgcagttctcgc
tgctcgtttttctcttatcagaatctatcaatggtgaatacggtgctcactgaactcgac
gacaaaattgtgcgcagcatggccgtgggcgctgttttttcagactttggcgggaagata
aattcacttgactttcatcggaaagacgatttattggtcacggctagtgaggatgagtcg
gtccgtctgtacgacatcgttaatgctaagttgctcaaaaccacatatcataagaaacat
ggcaccgatcgtatttgctttactcatcatccaagctctgttatttgctcaacaaaatct
aatttggattctactggagaatctttgcggtatctgtcaatgtatgataatcgaattctc
cgctactttaaaggccataaagagagggttgtttccctctgcatgtctccagtaaatgat
tgcttcatgtctggttctcttgaccacagtgtcagaatgtgggatcttcgtgtaaatgct
tgccagggaattttacatctacgtggtagaccgacagttgcatatgatcaacagggtttg
gtctttgcagtggcaatggaaggtggtgcaataaaattatttgattcacgatcttatgac
aagggcccctttgacacctttttagttggtggtgatagagcagaggtttgtgatatcaaa
ttcagcaacgatggcaaatcaatgctcttgacaacaacaaataacaatgtttatgttctt
gatgcatatggaggagagaagcggtttgctgtcaatttggagccatctccaaatgaaact
attgaagcaactttttccccagatgggcagtatgtggtctcaggatcaggagatggaaca
attcatgcctgggatatcaactcaagaaacgaggtggcatgttggaatgcccacacagga
gtatcttcatgcttgaaatgggctccccgtcgggtgatgtttgttgctgcctcttctgtt
ctctcattttggatacccaacgcccatgatcccgcttctggggaacctcaatctcaacaa
atttctcattcgaccccttctttgtcttag

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