Mangifera indica (mango): 123196775
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Entry
123196775 CDS
T07684
Name
(RefSeq) LOW QUALITY PROTEIN: denticleless protein homolog
KO
K11790
denticleless
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123196775
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
123196775
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Beta-prop_SPT8
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
123196775
NCBI-ProteinID:
XP_044466831
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All DBs
Position
14:complement(3294595..3299241)
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AA seq
511 aa
AA seq
DB search
METSRSQSFFQDIRSRELNGFKVTKRSYFGRAALDFAEIGALAVDHGGXRDPPLAVSFCK
TSRNSHIFAVSDEDGYVSLFDSRRKFSSFACHQENAEKARIIDWVAHQNAIFDLQWIKED
KNILTASGDQTIKVWDAQEKKCIGVLMGHTGSVKSLCSHPTNSDIVVSGSRDGSFALWDL
RCSTSSKRSGEFRLASSTVVNGAHLTSQAKRVRRGKAASMSITSVLCLKDEVSIATAAAV
NSVVKFWDTRNLKSQVTQACPYPESSDLKDKRSHGISSLSQDLNGVFLTASCMDNRIYLY
NVLQLEKGPIKCFSGCQIGSFYVKAAISPDAAHILSGSSDGNAYIWPVNKPQLDTVMLKS
HDGEVTAVDWCPFETGKMATSSDDFTVRLWNIQNNSCSSKRSPSSIRRRVTAIPSAECRK
LLINGELADSAKGPDNSNSSDEVVNQTNSSNPMNIPIVGTPDAKKRKLSSSDLEETFEKT
PEASLKSPSSVLNPPSSVKRKTIRDYFIVSP
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggagacttccagatctcaatctttcttccaagatatcagatccagagagctcaacgga
tttaaagtcacaaagagatcatattttggtcgcgcggcgttagattttgcagaaattgga
gctctggccgttgaccacggcggcngaagagaccctccgttggcagtttcattttgcaag
acaagtagaaactctcatatatttgcagtgtctgatgaggatggttatgtgagcttgttt
gattctcgaaggaaattttcttcttttgcatgtcatcaagagaatgcagagaaagccaga
attattgactgggttgcacatcaaaatgcaatttttgatttacagtggatcaaggaagac
aaaaacattctgacagcttcaggtgatcaaacgataaaggtatgggatgcacaagaaaag
aaatgtattggagtgttgatgggacacacagggagcgtaaaatctttgtgctctcatcca
acaaattctgatattgtagtctctggttcaagagatgggtcctttgctctatgggacttg
agatgcagtactagttccaaaagaagtggggaatttcgcttagcctcatctactgtggta
aacggagctcatcttacgtctcaggcaaaaagggttaggcgtggcaaggctgcttccatg
agcattacatcagttctttgtctgaaagatgaggtgtccattgcaactgctgccgcagtg
aacagtgttgtaaaattctgggatacaagaaatcttaaatctcaagttactcaggcatgt
ccttatcctgagtcatcagatttaaaggataaaagatcacatggtatttctagcctttct
caagacttaaacggagtgttccttacagcttcatgcatggacaatagaatatatttgtac
aatgtacttcagcttgaaaagggtcctataaaatgcttctctggatgtcaaataggatca
ttctatgttaaggcggcaattagtcctgatgcagcacacatactcagtggctctagcgat
ggaaacgcgtacatatggccggtgaataaacctcaattagatacagtcatgctgaaaagt
catgatggagaagtcacagctgtagattggtgtccatttgagactgggaagatggcaact
tcttcagatgatttcacagttcggttatggaacatacagaacaattcttgttcgagcaaa
agatctccatcttccattcgaaggagagtaacagcaattccgagtgcagaatgcagaaaa
cttttgataaatggtgaattggcagattcagcaaagggtcctgataattcaaattcttca
gatgaagtagtgaaccaaactaattcttccaatcctatgaatatacctatagttggtact
ccggatgctaagaagagaaagttgtcatcatctgatttggaagaaacctttgagaaaacc
cctgaagcttctttgaagagtccatcttctgtgttgaaccctccttcctctgtgaaacga
aaaaccatccgagattactttatcgtatcgccgtag
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