Mangifera indica (mango): 123196819
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Entry
123196819 CDS
T07684
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
minc
Mangifera indica (mango)
Pathway
minc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123196819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123196819
03036 Chromosome and associated proteins [BR:
minc03036
]
123196819
Transcription machinery [BR:
minc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123196819
Coactivators
SAGA/TFTC/STAGA complex
123196819
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123196819
STAGA complex
123196819
TFTC complex
123196819
SAGA complex
123196819
SLIK complex
123196819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
123196819
NCBI-ProteinID:
XP_044466883
LinkDB
All DBs
Position
14:7383916..7388081
Genome browser
AA seq
543 aa
AA seq
DB search
MSIVPKETVEVIAQSVGINNLSTDAALALAPDVEYRMREIMQEAIKFMRHSKRTMLTTDD
VDGALKLRNVEPLYGFASGGPLRFRRAIGHRDLFYVDDKDVDFKDVIEAPLPKAPLDTAI
VCHWLAIEGTQPAIPENAPMEVITAPPDGRNKEQKDGLPVDIKLPVRHILSKELQLYFDK
ITELTVSRSNSILFKQALVSLATDSGLHPLVPYFTYFVADEVSRGLNDYSLLFSLMRIVW
SLLQNPHIHIEPYLHQLMPSVVTCLVAKRLGNRLADNHWELRDFTAKLVATICKRFGHVY
STLQTRLTKTLLNALLDPKRSLTQHYGAIQGLAALGPNVVRLLLLPNLEPYLHLLEPEML
LEKQKNEVKRHEAWRVYGALLHAAGQCIYDCLKIXPPMPSPPAHAVWKSSGKVLTRVPNK
RKTSMEDLEEQPPHKKVATDGSSGPVSTSSSSSPMQEEPVAATSLGDSDAGPSSYSGQIS
HDSRSGSRQSRGNGDSRASKISPLLPQIWKDDLKSGQLMVSLFGLFGEDILSFIPAPEMS
LFL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgtacccaaggagacggttgaggtgatagcgcaaagcgttggaattaacaat
ttgtctacagatgcagccctcgctctcgctcctgatgttgaatatcgaatgcgcgaaatc
atgcaggaagcaatcaaattcatgcgtcactccaagagaactatgctgacgacagatgat
gttgatggtgctttgaaattaaggaatgtggagccattatatggttttgcctcagggggc
cctttgcggttcagaagagctattgggcatagggatctgttttatgttgatgacaaggat
gtggatttcaaagatgtgattgaagctcctttacctaaagctcctcttgatacagcaatt
gtttgtcactggctagcaattgaagggacacaacctgcaattccagaaaatgctccgatg
gaagtaattactgctccacctgatggaagaaacaaagaacagaaggatgggcttcctgtt
gacattaaattaccagttagacatatattgtctaaggaacttcagctgtactttgataaa
atcactgagctaactgtgagcaggtctaattcaatacttttcaaacaagcattagtgagt
ttggccacagactcgggacttcatccattagttccttatttcacatattttgttgctgat
gaggtatctcgtggtttgaatgattattcccttctgttttctttgatgcgtattgtttgg
agtcttcttcagaatcctcacatacatatagaaccttatcttcaccaattgatgccatct
gtagttacctgccttgttgcaaaaaggctagggaatagacttgcagataaccactgggaa
cttagagacttcacagcaaaactggttgctacaatatgcaaaagatttgggcatgtttat
agcactcttcagacacgtttgaccaaaactctcctcaatgctcttttggacccaaagcga
tcattgactcaacattatggtgcaattcaaggtttagcagccctgggacccaatgtggtt
cgccttcttctactgccaaatcttgagccttatttgcatcttcttgaacctgagatgcta
cttgagaagcaaaaaaatgaagtaaagaggcatgaggcctggcgagtatatggggccttg
ctgcatgcagctggtcaatgcatttatgattgcctcaagatcnttccccctatgccatcc
ccaccagctcatgctgtctggaaatccagcggaaaagttcttactagagtgcccaataaa
cgcaagacatccatggaggacttagaagagcagccacctcacaagaaagtagcaactgat
ggatcatctggtccagtgtctaccagctcctcatcatctcccatgcaggaggaaccagta
gcagctacttctttgggtgattctgatgcaggcccgtcatcatattctggacagatttct
catgatagcagatcaggcagcagacaaagtaggggcaacggcgatagtcgagcttcaaag
atttcacccctcctaccacagatttggaaggatgacttaaaatctgggcagcttatggtt
tcattgtttggtctatttggggaagacattctctccttcattcctgctcctgagatgtcc
ctgtttttgtaa
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