Mangifera indica (mango): 123196833
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Entry
123196833 CDS
T07684
Name
(RefSeq) transcription factor IIIB 60 kDa subunit-like isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123196833
Transcription machinery [BR:
minc03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
123196833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
DUF6477
Zn_Ribbon_TF
Neurexophilin
Motif
Other DBs
NCBI-GeneID:
123196833
NCBI-ProteinID:
XP_044466904
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Position
14:complement(13430337..13440717)
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AA seq
618 aa
AA seq
DB search
MVWCTSCGKNVTGTRPYDSQLFCELCGKVLDYYNYSTEVTFVKNASGQSQLSGNLIRTIQ
SEYGASRERLLERAFDDMRQMKNALGIGDSDEIVHIAKRLYGMAVARNFTRGRRTEQVQA
SCLYFACREKMKPFLLIDFANYLNVNVYELGGVYLQLCQVLYLADESNIQKQLDPSIFLP
KFTDRLLPGGDKKVCGTARDILASMKRNWITTGRKPSGLCGAALYISALTHGLKFSKLDV
VKIVHICEATLTKRLTEFENTDSGSLTIEDFLARNKELQGSYSTDHPSSVSKESSLTEVL
CKHKDTGKPFAYGLCRSCYDEFMTISEGLEGGADPPAFQAAEKERMAKESAEENTLFEEE
LDSPVMSKATKVKLVEPESNGLSEAGRKEATNNGDDYSKSPRHDTGTEASDESDNFSDID
DLEVDGYLHNEEEQHLKKIIWEEMNREYVEEQAAKEAAAAAAREAFEASFKGNPEELKAA
RELAAAAQANVAKYKKEKQLKRAAEAKNTAPAQTALEATRQMLNKKRLSSKINYEVLEKL
FEDSEDADNTKRPRTKSQENEDKLASTGKKEHEWDDTLEDGDLDGEDDYNNEQDAEGMFY
NELDYENPDDTFDLEDDY
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggtgtacgtcctgtggcaaaaatgttactggaacccgtccttatgattctcaa
ttattctgtgaactgtgtgggaaagttctagactattacaattattccactgaagttaca
ttcgtgaagaatgcatctgggcagagtcaattgtcaggaaatttgataagaactattcaa
agtgaatatggagcctcccgggaacggttattggaacgagcttttgatgatatgagacaa
atgaagaatgccttaggtattggtgacagtgatgagatagttcacatagctaaacgcctc
tatggaatggctgttgcacggaatttcactagggggcgtagaacagagcaagtgcaagct
tcttgtctatactttgcatgcagggagaaaatgaagccatttcttctaattgattttgcc
aattacttgaatgtcaatgtttatgagctgggtggtgtatatttgcagctgtgccaagtg
ctgtaccttgcagacgaatccaatatacagaaacaacttgatccttccatatttttgcct
aaatttactgaccgattactaccaggaggggataagaaggtttgcggtacagctcgggat
attttggctagcatgaaacgaaattggattacgacaggtagaaagcctagtggattgtgt
ggtgctgctttgtacatatctgcacttacacatggtctcaagttctccaagttagatgtt
gtgaaaattgtgcatatatgtgaagctacactcacaaagcggttgactgaatttgagaac
acagattctggaagcttaacgattgaggatttcctggctaggaataaggagctgcaagga
agttactcaactgatcaccccagttctgtgtcgaaagaatcaagcttaactgaggttctt
tgtaaacataaggatactggtaaaccatttgcatatgggctttgtagaagttgttatgat
gaatttatgacaatttcagaaggacttgaggggggagcagatcctccagccttccaggct
gctgaaaaagagagaatggccaaagaatctgccgaggaaaatacactttttgaggaagaa
ctagacagcccagttatgagcaaggccacaaaagtaaagttggtagagccagaaagtaat
gggctttcagaagctggtagaaaggaggcaaccaataatggtgatgattatagtaaatca
cccagacatgatactggtactgaagcttcagatgaatcagataacttttcagacattgat
gatcttgaggttgatggctaccttcacaatgaggaggagcaacatctcaaaaagataatt
tgggaagaaatgaaccgggagtatgttgaggaacaagcagcaaaggaagcagctgcagca
gctgctagggaagcctttgaggctagtttcaaaggcaatcctgaggaattaaaagctgca
agggagcttgctgctgctgctcaagctaatgtggccaaatataagaaggaaaaacaacta
aaacgagctgcagaagcaaaaaacactgctccggctcagactgcattagaagccactcgc
caaatgctgaataaaaagaggctcagctccaaaatcaactatgaagtgctggagaaactt
tttgaggattctgaggatgcagataataccaagagaccgcgaactaaatcacaagagaat
gaagacaagttggccagtacagggaaaaaagagcacgagtgggatgatacattagaagat
ggtgacctggatggagaagacgattacaataatgagcaggatgcagaaggaatgttttat
aatgaactggattatgaaaatccagacgacacattcgatctcgaagatgactattaa
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