Mangifera indica (mango): 123196877
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Entry
123196877 CDS
T07684
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
minc03000
]
123196877
04121 Ubiquitin system [BR:
minc04121
]
123196877
Transcription factors [BR:
minc03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
123196877
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
123196877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
123196877
NCBI-ProteinID:
XP_044466959
LinkDB
All DBs
Position
14:complement(387482..391489)
Genome browser
AA seq
1093 aa
AA seq
DB search
MSSHSQVRNDRRDRSRYSAQATRQEWIPRGSSSTSSVINAPQTSNVIGNGVGGNTSHSFM
PRDNHGRGRNDLRGQKGRPVINRQDRNGSQDKEQKDLNLPQLVQEIQEKLSKGTVECMIC
YDMVRRSAPIWSCSSCYSIFHLNCIKKWARAPTSVDLLAEKSQGFNWRCPGCQSVQLLSS
KEIRYVCFCGKRPDPPSDLYLTPHSCGEPCGKQLEGEIPNSGLSKEDLCPHVCVLQCHPG
PCPPCKAFAPPRLCPCGKKLITTRCSDRKSVLTCGQQCNKLLNCLRHRCEQICHVGPCDP
CQILVNASCFCKKKLEVVLCGDMAVKGDIEAEDGVFSCSLTCGKELSCGHHKCGEICHPG
PCGDCELLPSKIKSCHCGKTSLQEQRNSCLDPIPTCTQNCGKALACGVHHCSEVCHSGDC
PPCLVHVTQKCRCGSTSRTVECYKTTGDEKFTCEKSCGRKKNCGRHRCSERCCPLSNSNN
LVSGDWDPHFCQMSCGKKLRCGQHYCESLCHSGHCPPCLETIFIDLTCACGRTSIPPPLP
CGTPTPSCQLPCAVPQPCGHSASHSCHFGDCPPCSVPIAKECIGGHVVLRNIPCGSKDIR
CNKLCGKTRQCGMHACGRTCHPPPCDAAGVSVPGLKTSCGQICGAPRRDCRHTCTALCHP
SAICPDVRCEFPVTITCSCGRITASVPCDAGGSSTGFNADTVLEASLVQKLPVALQPVES
TGKKVPLGQRKLMCDDECAKLERKRVLADAFDINPPNLDALHFGENSTVSELLADLYRRD
SKWVLSVEERCKFLVLGKNKASTNGLKVHVFCPMLKDKRDAVRLIAERWKLAVSAAGWEP
KRFIVVHVTPKSKPPSRIIGIKGASTVSATHPPAFDPLVDMDPRLVVSFLDLPREADISA
LVLRFGGECELVWLNDKNALAVFNDPARAATAMRRLDHGSVYYGAVVVMQNGASTATNAW
GGTGTVKEGAGLASLKGNPWKKAVVQELSWREDSWGDEEWSGDSGDLQASAWKKKDAPIA
SSVNRWTVLESETSASSSAASLKTEDPSKQVTTQPNLGFESNSSSLNPAGQPGTSLNETE
QLEVADDWEKAYD
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcactctcaagttcgaaatgataggagggataggtctagatattctgctcaa
gccactcgccaagaatggatcccaagagggtcatcatccacatcatcagttataaacgca
cctcagacctccaatgtgattggtaatggggttggtgggaacacgagtcatagcttcatg
cccagagataatcacggtagagggagaaacgacttgagagggcaaaaggggcgacctgtg
attaatcgccaggataggaatgggagtcaggacaaggagcagaaagacttgaatttgcca
cagcttgtacaagaaattcaggagaagctttcaaagggaacggttgagtgcatgatttgc
tatgatatggttagaaggtctgcgccaatatggtcttgttcgagttgttactcaattttc
catttgaattgcattaagaaatgggcccgggcacctacttctgttgatttgttagctgag
aagagtcaggggtttaactggcggtgcccaggttgtcaatctgtgcagcttttgtcatca
aaggagattcggtatgtttgtttttgtgggaagaggcctgacccaccttctgatttgtat
ttgactccgcattcatgtggggaaccatgtggaaagcagcttgaaggcgagattccaaat
tctggtttgagtaaggaggatctttgccctcatgtttgtgtcttgcagtgccatccaggt
ccatgccctccttgtaaggcattcgcaccaccccgtttgtgcccttgtgggaaaaaacta
attacaactcgatgctctgatcgaaagtctgttctaacctgtggtcagcagtgcaataag
cttcttaattgcttgcggcaccggtgtgagcagatatgccatgttggtccatgtgatccc
tgccagattcttgtcaatgcatcatgtttttgcaagaaaaagctggaggttgtcctttgt
ggagacatggctgtgaagggggatattgaagcagaagatggtgtcttttcttgcagttta
acttgtggaaaggagctgagttgcggacaccataaatgtggtgaaatttgtcaccctggc
ccttgtggggattgtgaattgttgccaagtaagattaagtcttgccattgtggaaaaaca
agcttgcaggagcaaaggaacagctgtttggacccaattccaacttgtacacaaaattgt
ggcaaagctcttgcttgtggcgtgcaccattgtagtgaggtgtgccattctggggattgc
ccaccatgtttggttcatgtcactcaaaagtgtcgctgtggttcaacatctcgaactgtg
gaatgctataaaacaacgggggatgagaagttcacatgcgaaaaatcttgtgggcggaag
aagaattgtggcagacaccggtgtagtgaacggtgttgccctctttccaactctaacaac
cttgtctctggagattgggatccacacttttgccaaatgtcctgtgggaagaagctgagg
tgtggacaacattattgtgaatcattgtgtcacagtggtcattgccctccctgccttgaa
acaatcttcattgatctgacttgtgcttgtggtagaacttcaatccctcctccattgcct
tgcggtacaccaactccttcatgtcagctcccttgtgcagttcctcagccttgtggccat
tcagcatctcatagttgtcattttggagattgcccaccttgttcggtgcctatagcaaag
gagtgtattggtgggcatgtggttctcaggaacataccttgtgggtcaaaggatatcaga
tgtaacaagctctgtggcaaaaccaggcagtgtggtatgcatgcatgtggccgaacttgt
cacccaccaccttgtgatgctgctggggtatctgtaccaggcttgaaaacttcttgtggg
cagatctgtggtgctcctaggagagattgcaggcatacatgtacagcattatgccaccct
tctgccatttgtcctgatgtaagatgtgaatttcctgtcacaatcacttgttcttgtggc
cgaattacagccagtgttccttgcgatgctggaggcagcagtactggatttaatgccgat
actgttctagaagcttcccttgtgcaaaagctacctgtggcacttcaaccagtggaatca
actggcaagaaggttccccttggtcagagaaagcttatgtgtgatgatgaatgtgctaaa
ttggagcgtaaacgggttcttgcagatgcctttgatatcaaccctccaaatttagatgca
cttcattttggtgagaattctactgtgtctgagttgcttgcagacttgtataggcgagat
tcaaagtgggtgctttctgtggaggagagatgcaagttcttggtgcttggcaagaacaaa
gcatctacaaatggtctcaaggttcatgttttctgcccaatgctgaaggataagagagat
gcagtaagactaatagctgagaggtggaagcttgctgtcagtgctgctggttgggagccg
aagcgtttcattgtggttcatgtcacacccaaatctaagcccccatctcggattataggg
atcaagggtgcatctactgtaagtgcaactcatccaccggcttttgatcctttagtggac
atggatcccaggcttgttgtttcatttctagatttgcctagggaagcagatataagtgca
ttagtattgaggtttggaggggaatgtgaattggtttggttgaatgacaaaaatgcattg
gctgtttttaatgatcctgcccgagcagcaactgccatgaggaggttggatcatggatca
gtttattacggggctgttgtggttatgcagaatggtgcatcaacagctacgaatgcctgg
ggaggtacaggaacagtcaaagagggagcaggccttgcttcgctgaagggcaacccatgg
aagaaggcagtagttcaggagctgagttggagagaagattcatggggtgatgaagaatgg
tctggtgattcaggagatctgcaggcttctgcatggaaaaagaaagatgctcctattgct
tcttcagtaaaccgctggactgtcctagagtcagaaacatctgcaagttcatctgctgca
tctctcaaaactgaagatccttcaaaacaggtaacaactcaacccaatttaggatttgag
tcaaattcaagcagcttgaatccagcagggcagcctggaacaagtttgaatgaaacagag
caattagaggtggccgatgactgggagaaggcgtacgattga
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