KEGG   Mangifera indica (mango): 123196919
Entry
123196919         CDS       T07684                                 
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
minc  Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:minc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:minc04121]
    123196919
Ubiquitin system [BR:minc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     123196919
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C EIF3I Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd MIOS_WD40 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_WDR75_2nd WD_LRWD1 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 123196919
NCBI-ProteinID: XP_044467001
LinkDB
Position
14:complement(3332390..3336445)
AA seq 511 aa
METSRSQSFFQDIRSRELNGFKVTKRSYFGRAALDFAEIGALAVDHGGEETPPLAVSFCK
TSRNSHIFAVSDEDGYVSLFDSRRKFSSFACHQENAEKARIIDWVAHQNAIFDLQWIKED
KNILTASGDQTIKVWDAQEKKCIGVLMGHTGSVKSLCSHPTNSDIVVSGSRDGSFALWDL
RCSTSSKRSGESRLVSSTVVNGAHLTSQAKRVRRGKAASMSITSVLCLKDEVSIATAAAV
NSVVKFWDTRNLKSQVTQACPYPESSDLKDKRSHGISSLSQDLNGVFLTASCMDNRIYLY
NVLQLEKGPIKSFSGCQIGSFYVKAAISPDAAHILSGSSDGNAYIWQVNKPQLDRVMLKS
HDGEVTAVDWCPFETGKMATSSDDFTVRLWNIQNNSCSSKRSPSSIRRRVIAIPSAECRK
LLINGELADSAKGPDNSNSSDEVVNQTNSSNPMNIPIVGTPDAKKRKLSSSDLEETFEKT
PEASLKSPSSVLNPPSSVKRKTIRDYFIVSP
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggagacttccagatctcaatctttcttccaagatatcagatccagagagctcaacgga
tttaaagtcacaaagagatcatattttggtcgcgcggcgttagattttgcagaaattgga
gctctggccgttgaccacggcggcgaagagacccctccgttggcagtttcattttgcaag
acaagtagaaactctcatatatttgcagtgtctgatgaggatggttatgtgagcttgttt
gattctcgaaggaaattttcttcttttgcatgtcatcaagagaatgcagagaaagccaga
attattgactgggttgcacatcaaaatgcaatttttgatttacagtggatcaaggaagat
aaaaacattctgacagcttcaggtgatcaaacgataaaggtatgggatgcacaagaaaag
aaatgtattggagtgttgatgggacacacagggagcgtaaaatctttgtgctctcatcca
acaaattctgatattgtcgtctctggttcaagagatgggtcctttgctctatgggacttg
agatgcagtactagttccaaaagaagtggggaatctcgtttagtctcatctactgtggta
aacggagctcatcttacgtctcaggcaaaaagggttaggcgtggcaaggctgcttccatg
agcattacatcagttctttgtctgaaagatgaggtgtccattgcaactgctgccgcagtg
aacagtgttgtaaaattctgggatacaagaaatcttaaatctcaagttactcaggcatgt
ccttatcctgagtcatcagatttaaaggataaaagatcacatggtatttctagcctttct
caagacttaaacggagtgttccttacagcttcatgcatggacaatagaatatatttgtac
aatgtacttcagcttgaaaagggtcctataaaatccttctctggatgtcaaataggatca
ttctatgttaaggcggcaattagtcctgatgcagcacatatactcagtggctctagcgat
ggaaacgcgtacatatggcaggtgaataaacctcaattagatagagtcatgctgaaaagt
catgatggagaagttacagctgtagattggtgtccatttgagactgggaagatggcaact
tcttcagacgatttcacagttcggttatggaacatacagaacaattcttgttcgagcaaa
agatctccatcttccattcgaaggagagtaatagcaattccgagtgcagaatgcagaaaa
cttttgataaatggtgaattggcagattcagcgaagggtcctgataattcaaattcttca
gatgaagtagtgaaccaaactaattcttccaatcctatgaatatacctatagttggtact
ccggatgctaagaagagaaagttgtcatcatctgatttggaagaaacctttgagaaaacc
cctgaagcttctttgaagagtccatcttctgtgttgaaccctccttcctctgtgaaacga
aaaaccatccgagattactttatcgtatcgccgtag

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