Mangifera indica (mango): 123197451
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Entry
123197451 CDS
T07684
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
minc
Mangifera indica (mango)
Pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123197451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123197451
Spliceosome [BR:
minc03041
]
Complex A
Other components
Complex A specific factors
123197451
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
zf-CCHC
PHD_4
RRM_5
KH_PNO1_2nd
RRM_7
RRM_10
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
123197451
NCBI-ProteinID:
XP_044467697
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All DBs
Position
15:3826953..3832989
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AA seq
790 aa
AA seq
DB search
MESLDSNSQFQTLDYIPNQNQDPPLSETVDPDSQNPPKTLALDSQIPQKASENDRNNNNA
RDSDNSNNNVIADYVKQKPLLSENGLTNTHSGTDKDQSGGEEETSSRRRRRSRWDPPPSE
TGSGNQVDNNNDSGSGTRKRKSRWADDEPKPLIQLPDFMKDFTGGIEFDPEIQALNSRLL
EISRMLQSGLPLDDRPDGQRSPSPEPIYDNMGIRINTREYRARERLNKERQEIISQIIKR
NPAFKPPADYRPPKLHKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKG
SVKEGRLQQKRDLKPDLSENEDLHVLVEAETQESLEAAAAMVEKLLQPVDEVLNEHKRQQ
LRELATLNGTIRDEEYCRLCGEPGHRQYACPSRTSTFKSDVLCKICGDGGHPTIDCPVKG
TTGKKMDDEYQNFLAELGGTLPESATKQSSTLALGPGTYGSNPPWQTGSSGNTSHPGLGS
NGVTAIKEFDDTNLYIGYLPPTLDDDSLIRLFSSFGDIVMAKVIKDRVTGASKGYGFVKY
SDVQMANNAIASMNGYRLEGRTIAVRVAGKPPQPTVPPGLPTSAVPTYPVASQPVGGYPS
QQFTPSGPPPNPPPASYTGTPVPWGPPVPPPYAPYAPPPPGSTMYPPVPGQPMPPYGVQY
PATVQTAQPGAPSQTVTATEAQQQSFPPGVQSESSTSAAALSTNLYGSSVAPMLPNAQPA
YVTASLGYPPYYTAVPPPPPPAAASTVDHSQSLVNVPWATNPPVPPPVSSAEKATYGADA
EYEKFMAEMK
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggaatctcttgattccaactcccaatttcaaaccctagattacattccaaatcaaaat
caagaccctccgttatcagaaaccgtagatcccgattcacaaaacccgcctaaaaccctg
gcactcgattctcaaattccccaaaaggcctccgaaaacgaccgcaataacaacaacgcc
agggacagtgataattctaataataacgtcatcgccgactatgttaagcaaaagccttta
ttgtcggaaaatggtctgacaaatactcattccggtaccgacaaggatcaatcgggaggt
gaggaggagaccagtagcagaagacgccgtcgtagcaggtgggacccgcctccgtctgag
accggcagcggaaatcaggtggataataataatgactcggggagtgggaccaggaagcgg
aaatcacggtgggcagatgacgagccgaagccccttattcagttgccagattttatgaag
gacttcactggaggtatcgagtttgatcctgaaattcaagctttgaatagtcggctacta
gaaatttctagaatgttgcaatctggtttgcctttagatgatagaccagatgggcagcga
agtccttctcctgaacccatctatgataatatgggaattaggataaatactagagaatat
agagcacgagagagattgaataaagagagacaggagattatatctcaaattattaaacga
aatccagcatttaagccaccagcggattacaggcctccaaaacttcacaagaagctttat
ataccaatgaaagagtatccaggttataattttatcgggctgattattggaccaagagga
aacactcagaagagaatggagagggaaacaggtgcaaagattgtgattcggggtaaagga
tctgtgaaagagggaaggctgcaacaaaagagggatttgaagccagacctatcagagaat
gaggatttgcatgtgttggtggaggcagagactcaggaatcacttgaggctgcagctgca
atggttgaaaaattgttgcagccagttgatgaggttttgaatgagcataaaagacagcag
ttgagggagcttgctaccttaaatgggactataagggatgaggagtattgtaggttatgt
ggtgagccgggacatcggcagtatgcatgtccctcgcgtacttcaacttttaagagtgat
gtgctttgtaagatttgtggtgatggtggccatccaactattgattgtccagtgaaggga
acaactgggaaaaaaatggatgatgaatatcagaatttcttggcggagttaggaggaact
cttcctgaatcagctaccaaacaaagttccaccttggctttaggtcccggtacttatgga
agcaatccaccttggcaaactggaagcagtgggaacacttcacaccctgggctagggtca
aatggagttacagccattaaggaatttgatgatacgaatttgtacattggatatttacca
ccaactcttgatgatgacagtttgattaggctgttttcatcatttggtgatattgtgatg
gctaaggttatcaaggaccgagttactggagcaagcaaaggttatggttttgttaagtat
tctgatgttcagatggctaataatgctattgcaagcatgaacggttaccgtcttgagggg
agaaccattgctgtaagagttgctggtaagccgcctcagcctactgtgcctcctggcctt
ccaacatcagcagttcccacttaccctgttgcttctcaaccagttggtggctatccatct
cagcagtttacaccaagtggccctcctccaaatccaccccctgcaagctacacagggact
ccagttccatggggaccaccagttcctccaccttatgctccttatgctcctcctcctcct
ggttcaaccatgtaccctcctgttcctggtcaaccaatgcccccatatggagtgcaatat
cctgcaacagtgcagacagctcagcctggtgccccatcacagactgtgactgcaactgaa
gcacaacaacaaagctttccaccaggtgtgcaatctgaaagcagcacttctgctgcagct
ttatcaacaaatttgtatgggagctctgtggcaccaatgctgccaaatgctcaacctgca
tatgtaactgcctcattgggttacccaccttactacactgcagttcctcctcctcctcca
cctgctgcagcctcaacagtggaccattcacagagcttggttaatgttccttgggctact
aatcctccggtgccacctcctgtttcttctgcagaaaaggcaacttatggtgcagatgct
gagtatgagaagtttatggcagagatgaaatga
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