Mangifera indica (mango): 123197688
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Entry
123197688 CDS
T07684
Name
(RefSeq) AP-4 complex subunit epsilon-like
KO
K12400
AP-4 complex subunit epsilon-1
Organism
minc
Mangifera indica (mango)
Pathway
minc04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
123197688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
minc04131
]
123197688
Membrane trafficking [BR:
minc04131
]
Endosome - Golgi transport
Others
AP-4 complex
123197688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
HEAT_2
Cnd1
HEAT
INTS1_R4
HEAT_EZ
TOR1L1_N
PDS5
NPHI_C
V-ATPase_H_C
Motif
Other DBs
NCBI-GeneID:
123197688
NCBI-ProteinID:
XP_044467959
LinkDB
All DBs
Position
15:14649813..14659952
Genome browser
AA seq
961 aa
AA seq
DB search
MGSQGGFGQSKEFLDLVKSIGEARSKAEEDRIVLNEIEALKRRISEPDVPKRKMKEFIIR
LVYIEMLGHDASFGYIHAVKMTHDDNLVLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLK
SDNYLVVCAALNAVCKLINEETIPAVLPRVVELLGHSKEAVRKKAIMALHRFYQKSASSV
QHLVSNFRKKLCDNDPGVMGATLCPLCDLITIDVNSYKDLVISFVSILKQVAEHRLPRSY
DHHQMPAPFIQIRLLKILALLGSGDKQASENMYTVVGDIFRKCDSSSNIGNAVLYECICC
VSSVYPNPKLLESAADVVARFLKSDSHNLKYMGIDALGRLIKTSPEIAEQHQLAVIDCLE
DPDDTLKRKTFELLYKMTKSSNVEVIVDRMIDYMISINDNHYKTEIASRCVELAEQFAPS
NHWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDNADSHLRSSAVESYLWIIGE
PKLPAVFLQVICWVLGEYGTEDGKFSASYITGKLCDVAEAYSNDETVKAYAITALMKIYA
FEIAARRKVDMLPECQSLIEELLASHSTDLQQRAYELQAIIGLDAQAVEIIMPSDASCED
IEIDKNLSFLSGYVQQALEKGARPYIPEIEHSGMAAISNFRTQELQESSLQGLRFEAYEL
PKPTVSSRIPAVSPASSTELVPVPELSYPRNTQKVASLPSISRSDPSELRLQLDGVQRKW
GRPSYSSSETSTSSSVPDKTVNGVTKLVDAAGAINTRTHYTSYDSRKGQVEISPEKQKLA
ASLFGGSSKTERQTSATGHKAGKVGSHVAEKPQVSKGVDRSATEKIVAQPQPDLLDLGEP
TVSSGAPSYDPFKQLEGLLDSSQVTPSVNHNEAGSDKAPDILGLHSETAGSGSGSGADAS
LSSGLSNLTIKNAHEGTITSYSTQFSKGPNTKDALEKDALVRQMGVTPTHQNPNLFKDLL
G
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgggctcccaaggcggcttcggacaatccaaagagttcctcgacctcgtcaaatccatc
ggcgaggcccgatccaaggccgaagaagacagaattgtgctcaacgagatcgaagcccta
aagcggcgtatctcggagcctgacgttcccaaacggaagatgaaagagttcattattcgt
ctcgtctatatagaaatgctaggccatgacgcgtcttttggatacattcacgccgttaag
atgacgcatgatgataatttggtgctcaagcggactggctacttggctgtcacgttgttt
ttgaatgaggatcatgatttgattatcttgattgtgaatacgattcagaaggatttgaaa
tcggataattatttggtggtttgtgccgcgttgaatgcggtgtgtaagttgattaatgag
gagacgattcccgcggtgttgccacgggtggtggagttgttgggacattcaaaggaggcc
gttaggaagaaggcgattatggcccttcatcggttttatcagaagtcggcttcttcggtt
cagcatcttgtttctaattttcgaaagaaactttgtgataatgaccctggggtcatgggt
gctacactctgccctctttgtgatcttattacaatagatgtgaattcttataaggactta
gtgatcagctttgtaagtattcttaaacaagtagcagaacatagattgcctaggagttat
gatcaccatcagatgcctgcccctttcattcagatcaggctgctgaaaattctggcattg
ctgggaagtggtgacaaacaagcaagtgagaacatgtatactgttgtaggtgacatattc
agaaagtgtgattcatctagtaatataggaaatgctgttttgtatgagtgcatatgttgt
gtatcttctgtatatccaaatcccaagctattagaatctgcagcagatgttgttgccaga
tttttaaagagtgatagtcataatttaaaatacatggggattgatgcgcttggtcgtcta
ataaagactagcccagagattgctgaacaacaccaactggctgtcattgattgcttagag
gacccggatgacactctaaagcgaaaaacttttgaactactgtataagatgacaaagtcc
tccaatgtggaagtgattgttgaccgcatgattgattacatgattagcattaatgataat
cattacaaaaccgaaatagcatctcggtgtgttgaactggctgaacaatttgcaccaagt
aaccactggtttatacagaccatgaataaggtctttgagcatgctggagacctggtgaat
atcaaagtggcacataacttgatgcggttgatagctgaaggatttggggaggatgatgat
aatgcagatagtcatctgagatcatctgctgtggaatcatatttgtggattatcggagag
ccaaagcttccagcagtatttcttcaagtcatttgctgggtcttaggggagtatggcact
gaagatggaaagttttctgcttcgtacattactggaaaattatgtgatgttgcagaggct
tattcaaatgatgaaactgttaaggcttatgccattacggcactaatgaaaatatatgca
tttgaaatagctgctcggaggaaagtggatatgctacctgagtgtcagtctttgattgag
gaattattagcttcacactcaacggacttgcagcaacgtgcatatgaacttcaagccatt
attggcttggatgctcaagctgttgagattatcatgccctcagatgcaagttgtgaagat
attgaaattgataaaaatctctcattcctcagtggctatgtacaacaagctctggagaaa
ggggctcggccctatattccagagattgaacattctggaatggcagctatcagcaacttt
agaacccaagagctccaggaatcttcattgcagggtcttcggtttgaggcatatgagctt
ccaaagccgactgtgtcatcaaggattcctgcagtttctcctgcatcatctactgaacta
gttccagtgcctgagctatcctatcctagaaacacccagaaggtagcatcactcccatcc
atatcccgttcagatccttcagaactcagattacaacttgatggggtccaaaggaagtgg
ggtaggccatcttactcctcttctgaaacatcaacctcaagttctgttcctgataaaaca
gtgaatggtgtcacaaaattagtagatgcagcaggcgctataaatacaaggacacactac
acctcctatgattcaagaaaaggacaagttgaaatttctccagagaagcagaagcttgct
gcatcactttttggtggttcatcaaaaactgaaaggcaaacatctgcaactgggcataag
gctggcaaggtaggcagccatgttgcagaaaagcctcaggtgtcaaaaggagtggataga
agtgccacagagaaaattgttgctcaaccacaaccagatttgcttgacttgggcgagcca
actgtttctagtggtgcaccatcctatgatccttttaagcagctggaagggctgcttgac
tcaagtcaagtcactccaagtgtgaatcacaatgaagcaggttctgacaaagcacctgat
attctgggactacattcagagacagctgggagtgggagtgggagtggtgctgatgccagt
ctctcatctgggttgtcaaatctaaccataaaaaatgctcatgaaggaactataacatca
tattcgacacaatttagtaaaggaccaaacaccaaagatgcattagaaaaggatgctctt
gtgaggcagatgggtgtgaccccaacccatcaaaatcccaacttgttcaaagatttgtta
ggctga
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