Mangifera indica (mango): 123197707
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Entry
123197707 CDS
T07684
Name
(RefSeq) WD repeat-containing protein RUP2-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
minc
Mangifera indica (mango)
Pathway
minc04120
Ubiquitin mediated proteolysis
minc04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123197707
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
123197707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123197707
Enzymes [BR:
minc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123197707
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123197707
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
123197707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_TEP1_C
WD40_like
Beta-prop_NWD2_C
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
123197707
NCBI-ProteinID:
XP_044467978
LinkDB
All DBs
Position
15:complement(2218391..2219806)
Genome browser
AA seq
389 aa
AA seq
DB search
MKKDTERNFAGKGNTEEDKPAERKEQQEERTKIEWDFNLCTVVSSNTTEGAVSDTLGVIE
FDPSDSIFATGGIARKIRVYNIKSLLLEENNFTDVNWLDHSSAYEYYICTPAKLSSLRWK
PGTNGRVLGSGDYDGVVMEYDLERKMPIFERDEHGGRRVWSVDYSQWNPVVGASGSADGT
MQMWDPRYDGGKCIATVQPSLARSSVCCVEFNPFGGALVTLGCADKKAYAYDVRHMADPV
FVFDGHQKTVTYIRFMDEYALVTAATDGCLKLWNINETQIIRSYKGHVNSRSFVGLSVWR
NGGLLGCGSETNQVFVYDKRWGEPIWVHGFKPVAVGRTETGFVSSVCWRQAGEDQCTLVA
AGSDGALQVFVGKRKSSSSLPSSSSSSSH
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagacactgaaagaaatttcgcaggaaaaggaaatacagaagaagataaaccc
gctgaaagaaaagagcaacaagaagaaagaactaaaattgaatgggatttcaatctctgc
accgttgtttcttcaaataccacagaaggagccgtatcggataccctcggagtcattgaa
ttcgacccctctgattcaatcttcgcaaccggaggaatcgcgagaaagattagagtttac
aatataaagtctttgttgctagaggaaaataatttcacagatgttaattggttagaccat
tcgagcgcatacgagtattatatttgcaccccggctaagctgagtagcctgcggtggaaa
cctgggacaaacgggcgggtcttgggatccggagactacgatggagtcgtgatggagtat
gatctagagagaaaaatgccgatatttgaacgagacgagcatggtgggagacgggtttgg
agcgtggactattcacaatggaatccagtggtgggcgcctccggatccgccgatggcact
atgcaaatgtgggatccccgttacgacggtggtaaatgtatagcgactgtgcagcccagt
ttggcacgcagttcggtctgttgcgttgagtttaatccgtttggcggagcattggtaacc
cttggatgcgctgacaagaaagcttatgcgtacgatgtgcggcacatggctgacccagtg
ttcgtatttgatgggcaccagaaaacagtaacatacattcgattcatggatgaatatgct
cttgtaacagcagcaacagatggctgtttaaagctctggaacataaatgaaacccaaata
atcaggagttacaaaggacatgtgaacagcagaagctttgttgggttatcagtgtggaga
aacgggggattactgggctgtggatcagagacaaatcaagtgtttgtctacgacaagagg
tggggcgagcccatttgggtgcatgggttcaagccagtggctgttggtcgaaccgagact
gggtttgtgagcagtgtgtgttggagacaagcgggagaggatcagtgcacacttgttgca
gcaggatcagatggggctctgcaagtttttgtgggcaaaaggaaatcatcatcatcatta
ccatcttcttcttcttcatctagtcattaa
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