Mangifera indica (mango): 123197763
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Entry
123197763 CDS
T07684
Name
(RefSeq) sister chromatid cohesion protein SCC2-like
KO
K06672
cohesin loading factor subunit SCC2
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
minc03036
]
123197763
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
123197763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
Cnd1
PHD
PHD_2
zf-RING_16
Cas12f1-like_TNB
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
123197763
NCBI-ProteinID:
XP_044468075
LinkDB
All DBs
Position
15:13202653..13215711
Genome browser
AA seq
1789 aa
AA seq
DB search
MSSFPCSSASSSGSGPASAARGIGLCNTIHSEVAPCLPLPSLPVFFGALDPDLCLFDEVS
TDSYGSYRSLNRPEILAQSSEIADLLRETDVSYLHLRDNLNSVSCSYVEPLELHNQVLRC
DAEAFEYVTPGKQSQFKDQVSGHTILERKDSQTSVPFTSGLQRDYNDSQNHQHNHVPVNE
VSTSSSRKPKVKKKGGDDFSSSAQPDTTELRDAAIESFCEMLEDFCGRATIPTDDQNEPE
WLSIPVADVRMLVNEIMSIRAKKLLHLVSVDILVRLLRVLDHQIHRAEGLTIAEREHQDS
DAIAMVFCALESIHAALAVMAYEQMPKRLFKEEIIERILEFSRHQIGDVMSAYDPSYRPL
HRPNENGAFEADEDEEFDADFGSASKRRRSVKTVKVKKPALNKVSGSMNSILQKLCTILG
LLEDLLLIEKLSDSCILQLVKTSFTTFLVDNVQLLQLKAIGLISGIFYSYTQHRTYVIDE
ILQLLWKLPSSKRALRTYHLPDEEQRQIQMVTALLIQLVHSSANPPEAFRKASSGNSILE
VSIDASYPTKCHEAATETCCLFWTRVLQRFTSVKTQDANELKVMMENLVMDLLTTLNLPE
YPASAPILEVLCVLLLQNAGLKSKDISARSMAIDLLGTIATRLKQEAVLCSRDRFWIFQE
LIEEDNVDKSYSKDACSICLDGRVKKKLFVCQVCQRLFHADCMGVREHDVPNRGWYCQFC
LCRNELLALQSYCKSQCKDDGKKSQNQLKNNSEASDKITKLEIVQQMLLNYLQDVVSADV
VNFFVRWFYVCLWYKDDPKSQQKPMYCLARMKSKAIVRQSGTVSSLLMRDSIKKITIALG
QNNSFSRGFDKILQVLLASLRENSPIIRAKALRAVSIIVEADPEVLSDKRVQLAVEGRFC
DSAISVREAALELVGRHIASHPGVVLKYFEKVAERIKDTGVSVRKRAIKIIRDMCTSNTN
FSKFTTACNEIISRVSDDESSIQDLVCKTFYEFWFEEPSGLQTQYFGDGSSVPLEVAKKT
EQIVEVLKGMPNNQLLVTVIKRNLALDFFSQATKAAGINPVSLASVRRRCELMCKCLLEK
ILQVEEMNSEGVENCTLPYVLALHAFCVVDPTLCAPVSDPSQFVVTLQPYLKSQVDNRVV
AQFLESIIFIINSVLPLIRKLPQSVIEELEQDLKNMIVRHSFLSVVHACIKCLCSVSKVS
GKSSSVIAYLIQVFFKYLDGQKSDSKQFQQVGRSLFCLGSLIRYGNSLLSTSNDKKFDVG
SCLSLFKRYLQMDDFNVKVRSLQALGFVLIARPEYMLEKDIGKILEATLAPSSHIRLKMQ
ALQNVYEYLLDAESQMETDKVDNNEVQRMAEDGSVPVAAGAGDTNICGGIIQLYWDKILE
RCLDANEQIRQSAVKIVEVVLRQGLVHPITCVPYLIALETDPQEVNSKLAHHLLMNMNEK
YPAFFESRLGDGLQMSFLFIQSLGGGSPDGLSQKFQSKASGNMKGKSDGGSLSQAKLGVS
RIYKLIRGNRNSRNKFMSSIIRKYDNLSLDNSFIPFLIYCTEVLALLPFTLPDEPLYLIY
TINRIIQVRAGTLEANMKAMSTSLLQKDAQQTSRENGMFQQESYQPIFNHMTTMDLNGTM
KEMHDAQPIFYQMTSIDLNGTIQPEPILQMFSHRPPSMEAKMHDTNSVESCRISEEDLKK
IQIDSIAATALQLLLKLKRHLKIVYSLNDARCQAYYPTEVQKPGEILSRQNIPFDISDTR
VTLPSTYQEFMQRYQEFKNALKEDTIDYSVYTANIKKKRPTPRKGPRSG
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctttccttgtagttcagcttcgagctcgggctcgggcccggcctcggccgcc
aggggcatcggactgtgcaataccatacactccgaagtagctccgtgcttgccgctgccg
tcgcttccggttttctttggtgcgttggatccggacctatgtctgttcgatgaagtcagt
accgatagttatggtagttataggtcgttgaatcgtcccgagattctcgctcagtctagt
gaaattgctgatctgcttcgcgaaaccgacgtttcttatttgcatcttagagacaatcta
aattcagtttcttgtagctatgtggaacctttagaacttcacaaccaagttctccgatgt
gatgctgaagcgtttgagtatgtcactcctggtaaacaaagtcaattcaaggaccaagtg
tctggtcatacaattcttgaaagaaaagactctcagacaagtgtaccttttacaagtggt
ttgcaaagggattataatgattctcagaatcaccaacacaaccatgttcctgtaaatgaa
gtatccacatcatcttccaggaaaccaaaagtcaagaagaaaggtggtgatgacttctct
tcatcggcacaaccagataccactgaacttcgagatgctgccattgagagcttctgtgaa
atgttggaggacttttgtggcagagctaccattcccactgacgatcagaatgaacctgag
tggttatcgatacctgttgctgacgttagaatgcttgtaaatgaaataatgtccatacgt
gcaaagaagcttctacatttggtttcagtagatattcttgtgagactattacgggtgcta
gatcatcaaattcaccgagcagaaggtttgacaattgctgaacgggagcatcaagattca
gatgcaattgcaatggtgttctgtgcccttgaatccatacatgcagctttagcagtaatg
gcttatgagcaaatgccaaaacggcttttcaaggaagagatcattgaaaggattttggag
ttctctaggcatcaaataggagatgttatgtcagcttatgatccatcataccgtcctctg
catagaccaaatgaaaatggagcatttgaagctgatgaagatgaagaatttgatgctgac
tttggttcggctagcaagagaagacgcagtgtcaagactgtcaaagtgaagaaacctgct
ttgaacaaggtctctggttctatgaattccatacttcagaagctctgcactattcttggt
ttactcgaggatttgttgttgatagagaaattatctgacagttgcattttacaactggtg
aagacaagctttacaacatttttggtggataatgtccagctcttgcagttaaaggctatt
ggtttaataagcgggatattctattcatacactcaacatcgaacatatgtgatagatgaa
attctccagcttctttggaagttaccatcctctaagcgagcattgagaacatatcatcta
cctgatgaggaacagaggcagattcagatggttactgcattgctgattcagttggttcac
agtagcgcaaacccacctgaagcttttaggaaagcatctagtggtaattccatcttggaa
gtttcaattgatgctagttatcccaccaaatgtcatgaagcagcaacagagacatgctgt
cttttctggactcgtgttcttcaacgctttacaagtgtaaaaactcaggatgccaatgag
ctgaaagtaatgatggagaatcttgttatggatttactgacaacattgaacttaccagaa
tatcctgcctctgctcctattctggaggttctttgcgtcttactgcttcagaatgctggg
ctgaaatccaaggacatctcagcacgatcaatggccattgaccttcttggtaccattgca
accaggttgaagcaggaagctgtcctctgcagtagagacagattctggatatttcaggaa
ctgattgaggaggataatgtggataagagttactctaaagatgcatgttctatctgtttg
gatggaagggttaaaaaaaagttgtttgtatgtcaagtttgtcagagactttttcatgct
gattgcatgggggtaagagaacatgatgtacccaatcgtggttggtattgccagttttgt
ctctgccggaatgaacttctagcattacaatcatactgcaagtcacagtgcaaggatgat
ggaaaaaagagtcagaatcagttgaaaaacaattctgaagcttctgataaaattacaaaa
cttgaaattgttcaacagatgctcctgaattaccttcaagatgttgtctctgctgatgtt
gttaacttctttgttcgttggttttatgtgtgcttgtggtacaaggatgacccaaaatct
caacaaaagcccatgtattgtcttgctagaatgaaatctaaagcaatagtgcgtcaatct
ggaactgtttcatccttgttgatgagggactccatcaagaagatcaccatagctctagga
caaaataattctttctctagaggctttgataagattcttcaagtgcttcttgctagttta
agggaaaactctcctataatcagggctaaggctttacgagcggttagtataattgtggaa
gctgatcctgaggtgttgagtgacaaacgtgtacaattagctgttgaaggaaggttttgc
gactcagcaatatcagtaagagaggcagcattagaacttgttggccggcatattgcttca
catcctggtgttgttttgaagtattttgagaaagtggctgagaggataaaagatactgga
gttagtgtccggaaaagagcaatcaaaatcatccgagatatgtgcacctcaaatactaac
ttctctaaatttacaactgcttgcaatgagatcatttctcgtgttagtgatgatgaatca
agtatccaggatcttgtctgcaagacattttatgagttctggtttgaggaaccttctgga
ttgcagactcagtattttggagatggtagttctgttccattggaagttgctaagaagact
gagcagattgttgaagtcttaaagggaatgccaaataatcagcttcttgtcactgtcatt
aagcgcaacttggcccttgattttttttcacaggcaactaaagctgctgggatcaaccct
gtttctcttgcatcagtacgtagacgatgtgaattaatgtgcaagtgcttattggaaaaa
atattgcaggtggaggaaatgaatagtgagggagtggagaactgtacacttccttatgtg
ttggccttgcatgcattttgcgttgtggatcctacactttgtgctccagtttctgacccc
tcacaatttgttgtcactttacaaccatatctgaagagtcaggttgataaccgagtagtt
gcacagtttctggagagtataattttcataattaattctgtcctgcccttgattcgaaag
ttacctcaaagtgtaattgaagaactggaacaggacttgaagaacatgattgttcgacat
tcttttttgagtgttgtccatgcttgcataaagtgcctgtgctctgtgagtaaagtatca
ggaaaaagttcaagtgtaattgcgtatcttattcaggtttttttcaagtatttggatggc
cagaagtctgacagcaagcagttccagcaagtggggaggtctctgttctgtcttggatct
cttatccgttatggtaattccttgttaagtacctcaaatgacaaaaaatttgacgttggt
agctgtcttagtttgttcaaaagatatcttcaaatggacgattttaatgtgaaggttaga
tctttgcaggctttaggctttgttttgattgctaggcctgagtatatgttggaaaaggac
attggcaagatattagaggcaacattagcaccttcttctcatatccgtcttaagatgcaa
gcattgcaaaatgtgtatgaatatcttcttgatgcggaaagtcaaatggaaacagataaa
gttgataataatgaagttcaacgtatggcagaagatggcagtgtgcctgttgctgctggt
gccggtgatactaacatctgtggaggtataattcagttgtactgggataagattttggaa
agatgcttagatgctaatgaacaaattcgccagtctgctgtcaagatagtggaagttgtg
ctacgccaaggtcttgttcatcctattacttgtgttccatacttaatagcccttgaaaca
gatcctcaggaggtgaactcaaagttggcgcatcatttactgatgaatatgaatgaaaag
taccctgctttctttgaaagccgtctgggggatggccttcagatgtcttttctcttcatt
cagtcccttggtggtggttcccctgacggtctaagccaaaagttccagtccaaggcttca
ggaaatatgaaagggaaatctgatggtggctctttaagccaagcaaagcttggagtttct
cgaatttataagcttattcgtggaaacaggaattcaaggaacaaattcatgtcatctatt
attcgaaaatatgataatcttagcttggataattcatttatcccttttttgatatactgc
actgaagtccttgctttgctcccattcacattacctgatgaacccctttatttgatctac
actataaatcgaattatacaagttcgggctggcacactggaggcaaatatgaaagccatg
agtacaagtttgttacaaaaagatgcacagcagacttcacgtgagaatggaatgtttcag
caggagtcatatcagccaattttcaatcatatgaccacaatggatttgaatggaacaatg
aaggagatgcacgatgctcagcctattttctatcaaatgacgtcaattgacctgaatggg
acaattcaaccagagcccattcttcagatgttctcacatcgtcctccatcaatggaggca
aagatgcatgatacaaattcagttgaatcttgtagaatctctgaagaggatctaaagaaa
atccagattgactctattgctgccacagcattgcaactactgctgaagctgaagaggcac
ctaaagattgtgtatagtctaaatgatgcccggtgccaggcatattatccaactgaagtc
caaaaacctggagaaatcctttctagacagaacattcctttcgacatcagtgatacacgt
gtcaccttgccatcaacttatcaagaatttatgcagagataccaggaattcaaaaatgct
ttgaaagaagatactattgactactcagtttacactgcaaacataaaaaagaagcgccct
acaccccgaaaagggccaagatctggatga
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