Mangifera indica (mango): 123197784
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Entry
123197784 CDS
T07684
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123197784
Transcription machinery [BR:
minc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
123197784
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
IBB
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
123197784
NCBI-ProteinID:
XP_044468108
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Position
15:complement(1113497..1117680)
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AA seq
533 aa
AA seq
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MGVVTVSSSAARTPVGLSTKFQTHHSTLKKPLIVAFKGDKTDNTALVVPHEQIPLPIEAP
KQQRKTLGKGSKSLKRVKAIFTDEASPCTSEVDYHEAAAKLENIYKLSPAISTSDVEDNG
VMRRGRRRRKGSASEADTHKPVVRNLAKSPKRLNLDKRIELRKKKMDEVMEKRRRKKDVE
AENEKIEILLRDYSSSTDFVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKALVQVKEHLQK
DIGKEPTEAELAEATSMTVVQVRRCLQVGRAARNKLIKHNLRLVLFVMKKYFQDFANGPR
FQDLCQAGVKGLITAIDRFEPKRRFQLSTYGLFWIRHAIIRSMTVSSFTRVPFGLESVRA
EIQRAKLELLFELQRSPTEEEIIKKVGISPERYREVMKASKPVLSLHSRHAVTQEEFING
ITDVDGVETEKPRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLGI
SREMVRKHEVKALMKLKHPTRVDYLRQYVKLGKEEKLKHSHGVCWSIVKLLKR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtctctagttcagctgctagaactccagttggattgagtaccaag
tttcaaactcaccattcaacattaaagaaaccattgattgtggcattcaaaggggataaa
acagataatacggctttagtagtgccacatgagcaaattccattgccgatagaagcgcct
aagcagcaacgaaagacactaggaaaaggtagcaaatctttgaagagggtgaaagcgatc
ttcactgatgaggcctctccatgcacatcagaagtggattaccatgaagctgctgccaaa
cttgaaaacatctacaagcttagtccagcaattagtacttcagatgttgaagataatggt
gtaatgaggagaggaaggcggaggagaaaagggagcgctagtgaagctgatactcataaa
ccagtagttaggaacttggctaagagtcctaagagattgaatcttgataaaaggattgaa
ctgaggaagaagaagatggatgaagtgatggaaaaaagacgaagaaaaaaggatgtcgag
gctgaaaatgagaagattgagatacttttaagggattattcatcatcaactgatttcgtt
agcttggattggaaaaaaatgaagatacctccagttctttcctctacagagcatacttgg
ttgttcaagctgatgcagcctatgaaggcactcgttcaagtaaaggagcatttgcagaag
gacatagggaaagaaccaaccgaggctgaattagctgaggcaacaagtatgactgtggtt
caagtgaggagatgcttgcaggttggtcgagctgcacgaaacaagctcattaaacacaat
ctccgccttgttttatttgtaatgaaaaaatattttcaagactttgcaaatggccccaga
tttcaagatctctgtcaggctggagtgaagggacttatcacagcaattgatcgttttgaa
ccaaaaaggagattccagctatctacttatggcctgttttggatcaggcatgcaattata
cgttcgatgacagtttcaagcttcacacgtgttccatttggccttgaatcagtaagggca
gaaatccagagagcaaaacttgaattgttgtttgagcttcagagatcaccaacagaggaa
gagataattaaaaaggttggtatctcgcctgagaggtaccgtgaagtgatgaaggcctca
aagcctgttctttctctccattcaaggcatgcagtcacccaagaagagttcattaatggg
attactgatgttgatggggttgaaactgaaaagccgaggcaaccagctcttctcaggctt
gcactagatgatgtgcttgattctctaaagcctaaggagagcttggtgattagacagaga
tatggattagatggaaaaggcgatagaacattgggagaaattgcagggaacttaggtatt
tcaagagaaatggtacgcaagcatgaggttaaggctctcatgaagctcaagcatccaact
cgagttgattatcttcgccagtatgtgaaactgggaaaagaagagaaattgaagcattca
catggagtgtgttggagtattgtaaaattattgaaaagatag
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