Mangifera indica (mango): 123197999
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Entry
123197999 CDS
T07684
Name
(RefSeq) ubiquitin receptor RAD23c isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
minc
Mangifera indica (mango)
Pathway
minc03420
Nucleotide excision repair
minc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123197999
09124 Replication and repair
03420 Nucleotide excision repair
123197999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
minc03051
]
123197999
03400 DNA repair and recombination proteins [BR:
minc03400
]
123197999
Proteasome [BR:
minc03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
123197999
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
123197999
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
UBA_Ucp12
Dsc3_N
Rad60-SLD_2
CUE
TECR_N
UBA_RAD5A
UBA_3
Crinkler
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
123197999
NCBI-ProteinID:
XP_044468501
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All DBs
Position
15:11734379..11740473
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AA seq
384 aa
AA seq
DB search
MKVFVKTLKGTHFEIEVKPEDKVADVKKNIESVQGADVYPAAQLMLIHQGKVLKDDTTLE
ENKVAENSFVVVMLTKSKVSSSGPSTASAVPANPAQPTTTPTVSTQPPTTSQIPAPAVAT
PQAVPESTPATPPPVSSSGSDIYGQAASNLVAGSNLETIVQQILDMGGGSWDRETVLRAL
RAAYNNPERAVEYLYSGIPEQTGVPPVSRVPAGGQPVNPPAQVQQPAAPAPASGPNANPL
DLFPQGLPNMGSNASAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPGLMRLI
QEHQADFLRLINEPVEGGEGNILGQLASAMPQALTVTPEERDAIERLEAMGFDRALVLEV
FFACNKNEELAANYLLDHMHEFED
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttttgtgaagactttgaagggaactcacttcgagatcgaagtgaagcccgaa
gacaaggttgctgatgtgaagaaaaatatagaaagtgtacaaggtgcagatgtttatcca
gctgcacaactgatgcttattcaccagggaaaagttcttaaggatgacacaaccctggaa
gaaaacaaagtcgctgaaaacagttttgttgttgtcatgttgaccaagagtaaggtctcg
tcaagtggaccctcaactgcttcagctgtgccagcaaatccggcccaaccaactacaaca
cccactgtatcaacacaaccacccacaacatctcagattcctgcacctgctgtggcaacg
ccacaggctgtacctgaatctacccctgctacacctccacctgtctccagttcaggatca
gatatctatggccaagccgcatcaaatcttgttgcgggaagtaatttagaaactatcgtt
caacagatacttgatatgggtggaggtagttgggacagagaaactgttctccgtgctcta
cgtgctgcatataacaaccctgaaagagctgttgaatatctgtattctggcattcctgaa
caaactggagttccaccagtttctcgagtccctgctggtgggcagcctgtaaacccacca
gcccaggttcaacaaccagcagcacccgcacctgccagtggtcccaatgcaaacccactg
gatctttttcctcagggccttccaaacatgggttcaaatgcaagtgcaggcaccttggat
ttcttgcgcaacagtcaacagtttcaagcattgcgagctatggtgcaagcaaatcctcaa
attttgcagcctatgcttcaggagcttggaaagcaaaatccagggcttatgaggctcatc
caagagcatcaggctgactttttgcgcttgataaatgagcctgttgaaggaggagagggg
aacatactgggtcagttggcctcagcaatgccacaggctttgactgtgactcctgaagag
agagatgcaattgagcgtcttgaagcaatgggttttgatcgagctctagtgttggaggtg
ttctttgcatgtaacaagaacgaggaattggcagccaactatcttttagatcatatgcac
gagtttgaggattga
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