Mangifera indica (mango): 123198161
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Entry
123198161 CDS
T07684
Name
(RefSeq) aladin isoform X1
KO
K14320
aladin
Organism
minc
Mangifera indica (mango)
Pathway
minc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123198161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123198161
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123198161
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EML_2
WD40_Prp19
PD40
WD40_MABP1-WDR62_1st
Lactonase
Motif
Other DBs
NCBI-GeneID:
123198161
NCBI-ProteinID:
XP_044468728
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Position
15:9155463..9164696
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AA seq
437 aa
AA seq
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MPCFPNPGTVTICEINRDLITADVLSDDRAKETYGKLIGMVFSPVPFQSEEPDHQETEQG
GRRNGETEGFLSTLLGLKRIFYPNHVNLLPEVDLQGVSWHQYKNIIAFISGTNQVIVRDF
EDSEGKDPCILTSESQRNVQVLEWRPNGGRSLSIGCKGGICIWAASYPGNAASVRSGAAS
FLGTLSRGSGTRWTLVDFLQSENGEHITGLSWSPDGRWLASASYESSSFTIWDVAQGLGV
PIRRGLAGISMLKWSPTGDYFFSAKFDGTFYLWETNLWTSEPWSSTSGFVKGATWDPEGR
MILLAFSGSSTLGSIHFASKPPSLDAHLLPVDLPEILSLTGSQGIEKVAWDDSGERLAVS
YKGGHDIYKGLIAVYDVRRSPLISVSLIGFIRGPGDYPKPLTFAFHDKFKQGPLLSVCWS
SGFCCTYPLIFQSHVLP
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgccttgttttcctaatcctggcactgttaccatttgcgaaatcaacagagatttgatt
actgccgatgttctgtctgatgatcgagctaaagaaacttatggaaaactcattggaatg
gtgttcagtccggtgccgtttcagagtgaagaacccgatcatcaagaaactgagcaggga
ggcagaagaaacggtgaaacagagggttttttgtcaacattgctgggccttaaacgcatt
ttttatcccaatcatgtgaacttgttacctgaagttgatcttcaaggtgtaagttggcac
caatataagaatatcattgcgtttatctctgggactaatcaagttatagttcgtgatttt
gaggattcggaggggaaggatccatgcattttgactagtgagtctcaaagaaatgttcaa
gttcttgagtggagaccaaacggggggaggtctctctctataggatgcaagggtggaatt
tgcatatgggctgcttcttatccaggtaatgcagcatctgtgagatctggggctgcttca
ttcttgggaaccctctctagaggctctggaactcgatggactctagttgactttcttcaa
agtgagaatggagaacatataacgggcctctcatggagtccagatggaagatggttggca
tcagcctcatatgagagctcatcatttaccatttgggatgttgctcaagggctgggggta
ccaattcgacgtggattggctggcatatcaatgcttaaatggtcaccaacaggagattac
tttttttctgcaaaatttgatggaacattttatctttgggaaacaaacttgtggacttct
gaaccatggtcttcaactagtggctttgtcaagggagcaacatgggatcctgagggacgt
atgatattgcttgctttctctgggtcttcaacattgggctctatacactttgcatcaaag
cctccatcattggatgcacatctattacctgttgatttgcctgaaatactttccttaact
ggcagtcagggaattgagaaggtagcatgggatgactcaggggagcgattagctgtgtct
tataaagggggtcatgatatttacaagggtctcattgctgtatatgatgttagaaggagt
cctttgatttctgtttcactaattggttttattagagggcctggggactatccaaaacca
ctcacctttgcatttcatgacaagttcaaacagggaccattgctatctgtgtgctggagc
agtggattttgctgtacctatcctctcatttttcaatctcatgttcttccttag
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