KEGG   Mangifera indica (mango): 123198202
Entry
123198202         CDS       T07684                                 
Name
(RefSeq) RNA-binding protein Y14
  KO
K12876  RNA-binding protein 8A
Organism
minc  Mangifera indica (mango)
Pathway
minc03013  Nucleocytoplasmic transport
minc03015  mRNA surveillance pathway
minc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123198202
  09122 Translation
   03013 Nucleocytoplasmic transport
    123198202
   03015 mRNA surveillance pathway
    123198202
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:minc03019]
    123198202
   03041 Spliceosome [BR:minc03041]
    123198202
Messenger RNA biogenesis [BR:minc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     123198202
Spliceosome [BR:minc03041]
 Complex C
  Other components
   EJC/TREX
    123198202
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_3
Other DBs
NCBI-GeneID: 123198202
NCBI-ProteinID: XP_044468800
LinkDB
Position
2:14312337..14315135
AA seq 198 aa
MANTEVDALDFEDDDLMDEDGAVDVDASSSPRATASQPKLKSAITGGAPKKTKGRGFREE
ADAERHSRLADRNFDSLGSDGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKN
LHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGTELLTQTINVDWAFSNGPSTGPFKR
KNLRSARTHRSRSPRRRY
NT seq 597 nt   +upstreamnt  +downstreamnt
atggcgaacacggaagtggacgcgttggacttcgaagacgacgacttgatggacgaggac
ggcgcagtggatgtcgacgcttcctcttcgcctcgtgccactgcttctcagcccaagctc
aagtctgccatcaccggcggcgcccctaagaagaccaaaggccgtggcttccgtgaagaa
gccgacgccgaacgccatagccgcctcgctgatcgtaacttcgactccctcggctctgat
ggtggccctggcccccaaagatccattgaaggatggatcattttggtcactggggtacac
gaggaggcacaggaggatgatttgcagaatgcgtttggtgagtttggggagataaaaaac
ctgcatttaaatcttgatcgtcgtactggctttgtgaaggggtatgcactgattgaatat
gaaaatttcgaggaagctcaaaatgctataactgcaatgaacggaactgaacttctcacg
cagaccattaatgttgactgggccttcagcaatggtcctagcactggaccattcaaaaga
aagaatttgagatccgcacggactcatcgttcaaggagtcctaggaggagatactga

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