Mangifera indica (mango): 123198331
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Entry
123198331 CDS
T07684
Name
(RefSeq) single-strand DNA endonuclease 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
minc03400
]
123198331
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
123198331
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
Chromo_2
DUF5124
Motif
Other DBs
NCBI-GeneID:
123198331
NCBI-ProteinID:
XP_044468952
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Position
15:complement(2240895..2247453)
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AA seq
583 aa
AA seq
DB search
MGVKNLWNILESCKKTLPLHHLQNKRLCIDLSCWIVQLKRVYKCHASHSHYEKLYLSGLF
HRLRALIALNCTLIFVTDGSIPAIKLSTYRKRLNSGNEVTDDERQVTEDEANSDKVTSLK
RNMGSDFSCMIRDAKALGLALGVPCLDGIEEAEAQCALLNLESLMDVSHQILISFFLVQR
QCTGTFTLELGEEGHVVCYEMADIERKLGYGRNSLITLALLLGGDYSKGVHGLGPEEACR
IVKSIADNVVLERIASEGLSLVKKARNSRNLNGENQFLEVIDAYTKPKCHSADSDAVYRV
LVQHPILHTKLHQICAQFFEWPSEKTDEYILPKIAERDLRRFANLRTSSAAVELPLHKMP
VKCPVTGIIKPRRVRGTECFEVSWEESYGLKSSVVPAELIESACPEKIVEFKERKAAPRT
KKSKPRSRIDQKLQALSLDIESGSSSVPSVAFSSKTVMPENMTGVSEVNFTRHDPFLDAE
SESDGDGNSNAAMPLYQTALESESKADGNARIPSNPAAPTNANYEVIDLISPSPAHCRNV
SRSQKMSNQAISVIDLSDSDTERSPEHERKARELRLFLASIPD
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgaagaatttatggaatattcttgaatcctgcaagaaaacacttccactccac
catcttcagaacaagaggctttgcatagatctatcttgttggattgtgcaacttaaaagg
gtttataaatgtcacgcttctcactctcactacgaaaagctctatctcagcggtctcttt
caccgtctcagagctcttattgctttgaattgtaccctcattttcgttactgatggttca
attcctgccatcaaattatccacttacagaaagcgtttgaactcggggaatgaggtgact
gatgatgaaaggcaggtgactgaggatgaagcaaactcagataaagtgacatcacttaaa
agaaatatgggatccgatttctcatgcatgatcagagatgcaaaagctcttggattagca
cttggagttccttgcttagatgggattgaggaagctgaagcacagtgtgcactgttaaat
ttggaatcattgatggatgtttctcatcagattctgatatctttctttttggtgcaaaga
cagtgtacagggacattcaccttggaattaggggaagaaggccatgttgtttgttatgaa
atggctgatatagagagaaaacttggatatggaaggaactcattgattaccctagccctt
cttcttggaggtgattactccaaaggagttcatggtctaggcccggaggaagcatgccgg
attgttaaatccatcgccgataatgttgttcttgaacgaattgcctcagagggactttcc
ttggtaaaaaaggccagaaattcaaggaatttaaatggagagaatcagtttttggaagtg
attgatgcatacacaaagccaaagtgtcactcagcagactcagatgctgtctacagggtt
cttgttcaacatccaattttgcataccaaacttcaccaaatatgtgcacagttctttgag
tggccttctgagaaaacagatgagtatatccttccaaagattgctgaaagagatttacgg
cgatttgccaatttgcgcacttcatcagcagcagttgaacttccactacataagatgcca
gttaagtgccctgtaacaggaattatcaaacctcgtagagtacggggaacagaatgcttc
gaggtctcctgggaagagtcatatggcctaaaaagttctgtggttccggcagaactgata
gagagcgcttgtcctgaaaagatcgtggagtttaaagagcgaaaagctgccccaagaaca
aagaagtctaaacccagatctcgtattgatcagaaactccaggctctgtcgcttgatatt
gaatcaggaagcagttccgttcccagtgttgccttttcttcaaaaactgtgatgccagaa
aacatgactggtgtttcagaagtcaactttacacggcatgatccattccttgatgcagag
tcagaaagcgatggtgatggcaatagcaatgctgcaatgcctttgtatcaaactgctcta
gagtccgaaagtaaggctgatggcaatgcccgaatcccttcaaatccagctgctccaact
aatgctaattatgaagtcatagatcttatcagcccttcaccagctcactgccggaatgtt
tccagaagtcaaaaaatgagtaatcaagctattagtgtaatagatctaagtgattcagac
actgaaagatcacctgagcatgagaggaaggccagagagcttagattgtttctagccagc
attccagattaa
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