Mangifera indica (mango): 123199096
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Entry
123199096 CDS
T07684
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
minc
Mangifera indica (mango)
Pathway
minc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123199096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
minc04131
]
123199096
Membrane trafficking [BR:
minc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
123199096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
123199096
NCBI-ProteinID:
XP_044469869
LinkDB
All DBs
Position
16:complement(758774..768888)
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AA seq
795 aa
AA seq
DB search
MMIGDGIEDQEKWLSAGITGLQQNAFYMDRALDSNNLRDALKYSAQMLSELRTSKLSPQK
YYQLYMRAFDELRKLEMFFKEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSK
EAPAKDVLKDLVEMCRGIQHPLRGLFLRSYLSQISRDKLPDIGSEYEGDADTVIDAVEFV
LQNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQIEGVDLDMYKDIVL
PRVLEQVVNCKDEIAQYYLMDCIIQVFPDEYHLQTLEILLGAFPQLQPSVDIRTVLSRLM
ERLSNYAASSTEVLPEFLQVEAFSKLNNAIGKVIEAQVDMPILGAVTLYSSLLTFTLHVH
PDRLDYADQVLGACVKKLSSNGKLDDSRATKQIVSLLSAPLEKYNDIVTVLKLSNYPHVM
EYLDSETNKVMASVIIQSIMKNSTHISTAEKVEALFELIKGLIEDLDGSLHDEVDEDDFK
EEQNSVARLIQMLHNDDPEEMFKVICTVRKYILTGGPKRLPFTVPPLVFSALKLIRHLQG
PDQGSNENPFGEEETTTPKKIFQLLNQTIEILHGVPAPELALQLYLQCAEAADDCDLEPV
AYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSARLLK
KPDQCRAVYACSHLFWVDDQDNMKDGERVLLCLQRALRIANAAQEMSNATRGSTGSVTLF
VEILNKYLYFFEKGNPLITVAAIGSLIELITTEMQTDPNTTDPDADAFFASTMRYIQFQK
QKGGAVGERFEPIKA
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcggagacggcatcgaagaccaagagaaatggctctctgctggaatcactggt
cttcagcagaatgctttctacatggaccgcgctctggactcgaacaatcttcgagacgct
ttgaaatattctgcccaaatgttgtctgagcttaggacttcgaaactttctccgcagaaa
tactatcaactttatatgcgagcatttgatgagttgaggaagctggagatgttctttaaa
gaggagacacgacgtggttgctcaattattgatctgtatgagcttgtgcagcatgctggc
aacatattgcctagactgtatctactctgtacggtagggtctgtgtatataaaatcaaag
gaagctccagctaaggatgttcttaaagatcttgttgaaatgtgccgtggcattcagcat
cctcttcgggggctcttccttaggagttatctttctcaaattagcagggataagttacct
gatattggttctgagtatgaaggggatgctgatactgtcattgatgctgtggagtttgta
cttcagaacttcacagagatgaacaaactatgggtgcggatgcaacatcagggacctgcc
cgggagaaggagaaacgggagaaagaaaggagcgagctacgtgatcttgttggaaagaat
ctgcatgtcctcagtcagatagagggtgttgaccttgatatgtacaaagatattgtgctt
ccaagagttctggagcaggttgtcaattgtaaagatgagattgcacagtactacctgatg
gattgcatcattcaagtgtttcctgatgagtatcatttgcaaactcttgaaatattgctg
ggtgctttcccacagcttcagccatctgttgacattaggacagtgctatctcgactgatg
gaaaggctttcaaattatgcggcttcaagtacagaagtgttacctgagttcttgcaagta
gaagcattttccaagttgaacaatgccataggaaaggtgatagaagcacaggttgacatg
cctattcttggagctgtaactttatattcatctctgcttacatttacccttcatgttcac
cctgatcgccttgattatgcagatcaagtactgggagcttgtgttaaaaaactttctagc
aatgggaaactggatgacagcagagcaacaaaacagattgtttctctgttaagtgctccg
ctggagaaatataatgacattgtcactgtgttgaagctctcaaattaccctcatgtgatg
gaataccttgacagtgagactaataaagtcatggcatctgttataattcaaagcattatg
aaaaacagcactcatatttcaacagctgagaaggttgaggcattgtttgaattaattaaa
gggcttatcgaggacttggatgggagtcttcatgatgaggttgatgaagatgatttcaaa
gaagagcagaattctgttgcacgtcttattcagatgctgcataatgatgacccagaggag
atgttcaaggtcatatgtacagtaagaaagtatattttgactggaggaccaaaacgtcta
ccatttactgtgcctccccttgttttttctgcactcaagttgattcggcatcttcaaggt
ccagatcaaggttccaatgagaatccatttggagaagaggaaacaacaacaccgaaaaag
atttttcagcttttaaatcagactattgagattctgcatggtgttccagcacctgaattg
gcattacagttgtacttgcagtgtgcagaggctgcggatgactgtgacttggagcctgtg
gcatatgaatttttcactcaagcgtatatcctttatgaagaagaaatttcggattccaga
gcacaggtaacggctatacatttaataatagggactcttcagaggatgcatgtctttggt
gtagagaacagggatactctaacacacaaggctacagggtattctgcaaggcttttaaag
aagcctgaccagtgcagagctgtctatgcatgctcacatctcttctgggttgatgatcag
gataacatgaaagatggagagagagttctgctttgccttcaacgtgcactaagaatagca
aatgctgctcaagaaatgtccaatgctacacgaggcagcactggatcagtcacgcttttt
gtggagatactgaacaagtatctctatttttttgagaaggggaacccgctgatcactgtt
gctgcaattgggagcttgattgagctgattacaaccgagatgcagactgacccaaacacc
acggacccagatgcagatgctttctttgcaagcaccatgcggtacatacagttccagaaa
cagaagggtggtgctgtgggtgaaagattcgagcctatcaaggcgtga
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