Mangifera indica (mango): 123199171
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Entry
123199171 CDS
T07684
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123199171
Spliceosome [BR:
minc03041
]
Common components
Common spliceosomal components
General mRNP proteins
123199171
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
123199171
NCBI-ProteinID:
XP_044469984
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All DBs
Position
16:complement(10349037..10356650)
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AA seq
606 aa
AA seq
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MEFDEYEYLEKTVEEQQPPKDDDSSAKKKANREGAEKSERSYRKREDSEEEEEERVKSGK
RSRHEDEENGGRREREREKDRDRERDKDRSRRDREKERERDSDRDRERSREKEKDKERRE
RDRDREKDREREKERERRERREREKEKEKEKERDRERERDKERERERDRERRSSSRSRRS
SSRSRRDSEREREREKEREREREIREKERDLEMRESRRYKEKKEVVEPEADPERDQRTVF
AYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQ
LLLGQPVMVKPSEAEKNLVQSNASAAGATTGPYGAIDRKLYVGNLHFNMTEMQLRQLFEP
FGPVELVQLPLDIETGQCKGFGFVQFAQLEHAKAAQSALNGKLEIAGRTIKVSSVTDHVG
PQDTTAKSADFDDDEGGGLALNAQSRAILMAKLDRTGIATSIAGSLGVSMVNGSAANQQV
VSLPVIGQPAVPIPAVTAPVIPAPVSEFIGYPSECLLLKNMFDPAAETDPDFDSEIQEDV
EAECSKYGRVKHIHVDKNSAGFVYLRFESVEAAAAAQRAMHMRWFARRLISAIFMKPQDY
EDKFRG
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgacgagtacgagtatttggagaagacggtggaggagcagcagccaccgaag
gacgatgattcgtcagcgaagaagaaggcaaatcgagaaggagcggagaagagtgagcgg
agttatcggaagagagaggatagtgaagaggaggaggaggagcgggtgaagagtggtaag
agatcgcgacacgaggacgaggagaatggcgggaggagagagagggagagggagaaagat
agagatagagagcgggataaggatcggagtcggagagatcgggagaaggagagggagagg
gacagtgatagagaccgagagaggagtcgagagaaggagaaggataaggagaggagagag
agggacagggacagagagaaggatagggagagagagaaggagagggagagaagagagagg
agggagagagagaaggagaaggagaaggagaaggagagggatagggaaagagagagggat
aaggagagggagagggagagagatagagagaggaggagtagtagtaggtcgaggagaagt
agcagtaggtcgaggagagatagtgaacgggaacgtgaacgtgagaaggagagggagaga
gagagggagattagagaaaaggagcgtgatcttgaaatgcgagagagcaggagatataaa
gaaaagaaagaagtggtggaacctgaagctgatccagagagagatcaaagaactgttttc
gcataccagatgcctctgaaggcgactgaaagagatgtttatgagtttttctcaaaagcg
ggcaaggtgagggatgttcgactgatcatggatcggaattcaaggcgatcaaagggagtt
gggtatattgaattttatgatgtgatgtccgtgccaatggcgatagctttgtctggccaa
ctacttcttggacagcctgtaatggttaagccttctgaagctgaaaagaatcttgttcaa
tctaatgcttctgctgcgggtgccaccactggaccttatggagcaattgatcgaaagctt
tatgttggaaatttacactttaacatgactgagatgcagcttagacagctatttgaacca
tttggccccgttgagctggtgcaacttccccttgacattgaaacagggcagtgcaaaggt
ttcggctttgttcagtttgctcagcttgagcatgcaaaggcagctcaaagtgctctcaat
ggaaaattggagattgctggtcgcactattaaggtctcatctgttactgatcatgttgga
ccccaagatactacagcaaaatctgctgactttgatgatgatgagggtggtggactggct
ttaaatgctcagtcaagagcaattcttatggcgaagctggatcgcactggcatagccaca
agtattgcaggctcgcttggagtgtcaatggtaaatgggtcagctgcaaatcaacaagta
gtgagcttgcctgttattgggcaacctgcagttcctattcctgctgttacagctcctgtt
attcctgctccggtctctgaatttattggatatccaagcgagtgtttactgttgaagaat
atgtttgatcctgctgcagagacggacccggattttgattcagaaatacaagaagatgtg
gaagcagaatgttctaaatatggccgggtgaaacatatacatgtggacaagaacagcgct
ggttttgtgtatctacggtttgaatctgtggaagcagcagcagctgctcaacgggcaatg
catatgagatggtttgcacgcagattgatatcagccatattcatgaaaccacaggattat
gaagacaaattcagaggctga
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