Mangifera indica (mango): 123199489
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Entry
123199489 CDS
T07684
Name
(RefSeq) small RNA degrading nuclease 1-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
minc
Mangifera indica (mango)
Pathway
minc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123199489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
minc03009
]
123199489
Ribosome biogenesis [BR:
minc03009
]
Eukaryotic type
Pre-60S particles
RNases
123199489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
SlyX
Motif
Other DBs
NCBI-GeneID:
123199489
NCBI-ProteinID:
XP_044470453
LinkDB
All DBs
Position
16:complement(3019871..3025809)
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AA seq
518 aa
AA seq
DB search
MDQKLDILEKKVLVGIVKMVQKQGMQGTAGGWKDFLNSYDKKFGSSLSDPAKRSNDVLVS
FLKTFTEDDDLKFIAKVLQHHQNRDILELYEKKSPDDKSPEQRLVRLTLQHPQYALNYMF
PSCNEEWVITKLGEKSKVMTSNTMYAVDCEMVLCEDGSEALVRVCVVNRNLEVKLDELVN
PNKAVADYRSEITGVTAEDLVGVTCSLADIQRRMEKLLSHGNILVGHSLNNDLNALKVDH
PRVIDTSLIFKYSNGNRRPSLNNLCKSVLGYEIRKSGAPHDCLDDACAAMKLVLAVIEHG
FDNTMPIVQDVPEIDKAKLFIHRIPFNVPSEELHSVIPGDFTIEVKTSKRQQGDKYAAVA
IFSSPQEACQAFENVEGSLDKDSSGRQQKLVKFQTSKGVTRGIYVRKMACDALPGEVLVK
RALEGEENTGLSKKRKIEQINEEIMSGLDKCKCKEHIKEIERLRKMANSNQCEDHLREIE
RLKQELIEKDFQISKQHKMISLLEEKLQRKKDKKNKGR
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggaccagaaactcgatattttagagaaaaaggttcttgttggaattgttaagatggtc
caaaagcaaggaatgcagggcactgctggaggttggaaagactttttgaatagttatgac
aaaaagtttggctctagtttaagtgatccggctaagaggtccaacgatgttttggtatct
tttctaaagacattcactgaggatgatgatttaaagtttatcgcaaaagtgttgcaacat
catcagaatcgtgatatattggagctatatgaaaagaaatctcctgatgataaatcccct
gagcagaggctggttcgtttaactcttcaacaccctcagtatgcattgaattatatgttc
ccatcatgtaatgaggagtgggtaattaccaagcttggtgagaaatccaaagtgatgaca
tcaaacacaatgtacgctgttgattgtgagatggttctttgtgaagatggcagtgaggct
ttggtgagggtgtgtgttgtcaatcgcaatttagaggtaaagttggatgaacttgtgaac
cctaacaaagcagttgctgattatagatctgagattactggagttactgctgaagatctg
gttggtgttacctgttcattggcagatatacagagaagaatggagaagctactatcacat
ggaaacattttagtgggccacagtttgaataatgacctaaatgcactaaaagtagatcat
ccaagagtcattgacacctccttaatcttcaaatactcaaatggaaatagaagaccttct
ttgaataatttgtgcaagtctgtgctgggctatgaaattcggaaaagtggtgctccacat
gattgtttagatgatgcatgtgctgcaatgaagctagttcttgctgtaatagagcatggt
tttgataatactatgcccattgttcaagatgttccagaaatagacaaggcaaagctattt
atccacaggataccattcaatgtgcctagtgaagaattacacagtgttattcctggggac
ttcacaattgaagtcaagacatcaaagagacaacaaggagacaagtatgctgctgttgcc
atatttagtagcccacaagaagcatgtcaagcatttgagaatgtggaaggcagcctagat
aaggattcatctgggaggcagcagaaacttgtcaaattccaaaccagcaaaggtgtgact
cggggcatatatgttcgtaaaatggcatgtgatgctcttcctggcgaggttttggttaag
agagctctggaaggagaggagaacacaggtctatccaaaaaacggaaaattgagcagata
aatgaagagataatgtcagggttagacaagtgcaagtgtaaagagcacataaaggagatt
gaaagattgaggaaaatggcaaactcgaatcaatgcgaagatcacttgagagagattgaa
cgtttgaagcaagaactaatagaaaaggatttccagatttcaaagcagcataagatgata
tctctccttgaagagaaattacaaaggaaaaaggacaaaaagaataaaggaaggtga
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