Mangifera indica (mango): 123199521
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Entry
123199521 CDS
T07684
Name
(RefSeq) LOW QUALITY PROTEIN: receptor homology region, transmembrane domain- and RING domain-containing protein 1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123199521
Enzymes [BR:
minc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123199521
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123199521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
PA
zf-C3HC4
Rhodanese
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-RING_16
zf-ANAPC11
Polyhedrin
Motif
Other DBs
NCBI-GeneID:
123199521
NCBI-ProteinID:
XP_044470495
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All DBs
Position
16:684019..690707
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AA seq
442 aa
AA seq
DB search
MMTVLFGFSIYACVVVSLSSATVLWKPLSVSFPALPAKYAVDVGRSGSCGALYVADPPEA
CSPIRNISTFGEPKKVWFALIVRGQCTFEEKILNVQEAGYRAAIVYDDRPKADLLYMMMR
REEVKVHAVFTTNQVGKFLREHADGRRGECCIIKPYNGGMWTVLTIPILSISVVVAFLIL
AYLTPGGSIYWRGRQEPNLKTIDSQVVETLPSFVFGPASVSCCHGGETCAICLEDYVDGE
VIKVLPCQHEFHSNCVGSWLTKWGTFCPVCKLDMRTQTAGPEVKMRRWPYNSQTDMIVAY
IGTGAEEEEIVTVDVRAAKDLLNSGYVYLDVRYLSDCGEYKKGHPAAAKIFNIPYMXNTP
EGRVKNPYFLKEVTSLCKEEDLYIVGCQSGVRSLYATADLLSAGFKHVSNMGGGYLAWAQ
NGLKVKVEDEKPEDQKPREAEL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgatgacagtattgtttggattttcaatttatgcatgcgtcgtcgtttcactgtcctct
gctactgtgctttggaaacccctctccgtctccttcccggcccttcccgccaaatacgct
gttgatgtcggtaggtctggctcatgcggagctctttacgtggcagatccaccggaggct
tgttctccgattcgcaatatttcgacattcggtgaacctaaaaaagtgtggttcgcttta
attgtcagaggtcaatgtacattcgaggagaagatcctaaacgttcaagaggcgggatat
cgagctgccattgtttatgatgatagacctaaggctgatttgctttacatgatgatgaga
cgtgaggaagtaaaggtacatgctgtattcaccactaatcaagtcggtaaatttttgagg
gagcatgctgatggaagaaggggtgaatgttgcattattaagccttacaatggagggatg
tggacggtgctgaccatccccattttatcaatttctgtggtagtagctttcttgatttta
gcctatttaactcccgggggatcgatctattggcgaggaagacaggagcctaatcttaaa
accatagattcacaggtagtggaaactcttccttcttttgtgtttggtcctgcttctgtg
agttgctgccatggtggagaaacttgtgccatctgccttgaggattatgtagatggggaa
gtaattaaagttctaccctgccaacatgaatttcattcaaactgtgttggttcatggctg
actaagtgggggacgttctgcccagtgtgcaagcttgatatgagaacccaaactgcaggt
cctgaggtcaagatgcgacgatggccatataattcacaaactgatatgatagttgcctac
attggcactggagcagaagaagaagaaattgtgactgttgatgttcgtgcagctaaagat
ctgcttaactctggctacgtctatcttgatgtgaggtacctttcagactgtggagagtac
aagaaaggtcatccggctgcagctaaaatcttcaacattccttacatgntcaacactcca
gaaggtagagttaaaaatccttatttcttgaaagaggttacatccctttgcaaggaggaa
gatctttatattgtgggctgtcaaagtggagtcagatctctttatgcaacagctgatctt
ctcagcgctggattcaagcatgtgagcaacatgggaggagggtacttggcctgggcgcag
aatgggcttaaggtgaaggtggaagatgaaaaaccagaagatcagaagccaagggaagct
gagctttga
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