Mangifera indica (mango): 123199791
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Entry
123199791 CDS
T07684
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
minc
Mangifera indica (mango)
Pathway
minc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123199791
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
minc01009
]
123199791
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
minc03041
]
123199791
Protein phosphatases and associated proteins [BR:
minc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123199791
Spliceosome [BR:
minc03041
]
Common components
Common spliceosomal components
SR proteins
123199791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CoV_nucleocap
RRM_DEAH11
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
123199791
NCBI-ProteinID:
XP_044470784
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All DBs
Position
16:914464..917561
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AA seq
229 aa
AA seq
DB search
MADSPRKKIMRSPSPLREHSRSRSRSRSLSRPRQRSLSRSRGRSRSRSHGRGDDTNPGNT
LYVTGLSTRVTERDLEKHFSKEGKVASCFLVVEPRTRISRGFAFVTMDTTEDATRCIKYL
NQSVLEGRYITVERSRRKRARTPTPGHYLGLKSSRDYGHGYRGDRGSRYRSGHDDYGYRR
SPRPSPYQGGRDYSPVHSPHAGRSRRDRSRSLPHSPYGSPGRRYSRGSR
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctcctcgcaaaaagattatgcggtctccttcccctttgagagaacactcg
aggtctaggtctaggtctagatccttgtctaggccaaggcagagatcactgtcccgaagt
cgtggaagatcaaggtccagaagtcatggaaggggtgatgatacaaatcctggaaacaca
ctttacgtgactggtctatctacaagagtcacagaaagggaccttgaaaagcatttttcg
aaggagggaaaggttgcttcatgttttcttgttgtggagccccgcacgcgcatctctcga
ggttttgcttttgtcacaatggatactactgaggatgccactcgttgcattaagtatctc
aaccagtcagttcttgaaggacgatatatcactgtagagaggtctcggaggaaacgtgct
agaactcccacacccggacactatcttgggctgaaaagtagtagggactatggtcatggt
tatcgtggtgatcgcggtagtaggtatcgctctggccatgatgattatgggtatcgtagg
tctccaaggccctcaccctatcaaggaggtcgcgattattctcctgtgcactctcctcat
gctggaagatcaaggagggacagatccaggtcgctgcctcattccccttacggtagcccg
ggaaggaggtattcacgtggatctaggtga
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