KEGG   Mangifera indica (mango): 123200651
Entry
123200651         CDS       T07684                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
minc  Mangifera indica (mango)
Pathway
minc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    123200651
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:minc03021]
    123200651
Enzymes [BR:minc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     123200651
Transcription machinery [BR:minc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     123200651
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 123200651
NCBI-ProteinID: XP_044471892
LinkDB
Position
17:452150..461228
AA seq 1180 aa
MASKVEKCSSGVDMDIDDDEVADLSSIYDLDEESVTTFCRKASMSFFNEYGLISHQINSY
NDFIKNGLQMVFDSLGETIIEPGYDPSKKKESYWQYASVRFGKVSLDKPSFFAGTEGGVE
HNMLPRHARLQNMTYSSRIKVNVTVEVYTLKNVRSDKFKTGKEQYINKEVVRLDSKDILI
GRIPVMVKSDLCWMKDSDKRDCDFDHGGYFLIKGAEKTFIAQEQICMRRLLISNSQGWTI
AYKSEIKRNRLIVRLVEQSKVEGIGGGDKVLAVYFLSMEIPIWVLFFALGVSSDKEIIEL
IDYRAEEANILNIFFASIHDADNKCEDFRIHNNALNHLNKLIKSTIFPPGESVEECINMY
MFPSLHGSKQKARFLGYMVKCLLQAYTGRRKCDNRDNFRNKRLELAGELLKRELKVHINH
ARRRMIKLLQRDLYPDRTMHQIDYYLDASIVTNGLSRAFSTGAWSHPFRRMERISGVVAT
LGRTNPLQTMVELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAVT
GLVSTNITEPIVDQLFKCGMEKLVDDTCTSLEGMDKVFVNGDWVGVCKDSLSFVTELRSK
RRHREFPHQIEIKRDEHEGEVRIFSDAGRILRPLLVVENLGRIISIKGKSYNFQSLLDMG
IIEFIGTEEEEDCFTAWGVKYLLKELKEKKPVKFTHCELDMSFLLGLSCGIIPFANHDHA
RRVLYQSQKHSSQAIGFPTTNPNIRVDALSHQLYYPQRPLFQTMTSDCLGKPGYGLNKIL
PRPELYNGQNAIVAVNIHLGYNQEDSLVMNRASMERGMFRSEHIRSYKAEVDNKESMGKK
RMSDDMVNFGKIQSTRGRVDCLDDDGFPYIGANLQSGDIVIGKYADSGDHSIKLKHTERG
MVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIV
PDIVINPHAFPSRQTPGQLLEAALGKGIACGGLLRYATPFSTPSVEAITEQLHRAGFQKW
GSERVYSGRTGAMCNSMIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGG
IKFGEMERDCLIAHGASANLYERLFTLSDCSQMHICRKCKNVANVIQRTVSGGRKIRGPY
CRVCESVDDIIKTNVPYGAKLLYQELFSMGINLKFETEYC
NT seq 3543 nt   +upstreamnt  +downstreamnt
atggctagtaaggttgagaagtgttcaagtggtgttgatatggatatagatgatgatgaa
gtcgctgacttaagcagcatatatgatctggatgaagaatctgttacaactttctgcaga
aaggcttctatgtcattctttaatgagtatgggcttattagccaccaaattaattcatac
aatgacttcattaagaatggtctccagatggtctttgattctcttggtgagactataatt
gagcctggttatgatccatcgaagaagaaggagtcttattggcagtatgcttctgtaagg
tttgggaaggtctctcttgataagccaagcttttttgctggtactgaaggaggtgttgag
cacaatatgcttcctaggcatgccaggcttcagaatatgacatattcatccaggataaaa
gtaaatgttactgttgaggtttatactctgaaaaatgtcagaagtgacaaatttaaaact
ggaaaagaacagtacattaataaggaagttgtaaggttggatagtaaagatattttgatt
gggaggattcctgtgatggtgaagtctgacctctgctggatgaaggattctgataaacgt
gattgtgattttgaccatggtgggtactttctgatcaaaggtgcagaaaagacttttatt
gctcaagagcagatttgtatgagaagacttttgatatcaaatagccaaggttggactatt
gcatacaaatctgaaataaaaagaaacagactaattgtgagactggtagagcagtccaaa
gttgaaggtattggaggaggtgataaagtccttgccgtctatttcttgtcaatggagata
ccaatatgggtgttattttttgcccttggtgtctcatcagacaaggaaattatagagctc
atagattaccgagctgaagaagcaaacattttgaatatattctttgcttctatccatgat
gctgataataaatgcgaggacttccgaatacacaataatgctctcaaccaccttaataag
ctgataaagagtaccatatttccacctggggaaagtgttgaagagtgcatcaacatgtat
atgtttcccagtctccatggctcaaagcaaaaggctcgctttcttggctatatggtgaag
tgccttttacaggcatatacaggtcgtagaaagtgtgataatcgggacaattttagaaac
aagaggttggagttggcaggtgagttgcttaaaagagaattgaaagtgcatattaatcat
gctcggaggcgcatgatcaagcttttgcagagagacctttatccagatcgtacaatgcat
caaattgattactatctcgatgcgtcaatagtaaccaatggtctttctagagcattctcc
actggagcatggtcacatccctttaggcgaatggaaaggatctctggtgttgtggcaaca
cttggccgtacaaatcccttgcagaccatggttgaattgaggagaacaagacaacaagtt
cagtatactgggaaggttggagatgccagatacccacatccttctcattggggtaaggtt
tgctttctatctacaccagatggtgaaaattgtgggcttgtaaaaaatctggcagttact
ggacttgtaagtacaaatataacggaaccaatagttgatcaattgtttaaatgcggaatg
gagaaactggtagatgatacttgtacttcactggaaggaatggataaagtcttcgttaac
ggggactgggttggagtttgtaaggattccctttcatttgttactgagctaagaagtaag
cggcgacatagagagtttccacatcagattgaaataaaaagagatgaacatgaaggtgaa
gtacgaatattttctgatgctgggaggatattgcgccctcttttggttgttgagaatttg
ggcagaattatctcaattaaagggaagagttataacttccaatctcttcttgacatggga
attatcgaatttattggaactgaagaagaggaggattgtttcactgcatggggtgtaaaa
taccttctgaaggagttgaaagaaaagaaaccggtgaaattcactcattgtgaacttgat
atgtcatttttattaggtttgagttgtggaattatcccatttgccaatcatgaccatgca
agaagggttttatatcagtcacagaaacattcttcgcaggctattggttttcccacaaca
aatccaaacatacgagtggatgcattgtcgcatcagctgtattatccacaaaggcctcta
tttcagacaatgacttctgattgtcttggtaaacctggttatgggcttaacaaaatactg
ccaagaccagagctctacaatggacagaatgccattgtggctgtcaatattcatctggga
tacaaccaagaggattctttggtgatgaatcgagcatctatggaacgtggaatgtttaga
tctgagcacatcagaagttacaaggctgaggttgataacaaagaatcaatgggaaagaaa
aggatgtcagatgatatggtgaattttgggaagatacaaagtactagaggacgtgtggat
tgtcttgatgatgatggttttccttatattggagctaacctccagagtggtgacattgtt
atagggaagtatgctgattccggggatcacagtataaaactaaagcacactgaaagaggc
atggtacagaaagttgttctttcttctaatgacgatgggaaaaactttgctgtggtatct
ctgagacaggttcgatctccatgtcttggagacaagttctcaagcatgcatgggcaaaag
ggtgttcttggttttctggaatcccaagaaaattttccttttacaatacaaggaattgtc
ccagatattgttataaaccctcatgcttttccttcaagacaaactcctggtcaactattg
gaggctgctttagggaaggggattgcctgtggtggtttgttgagatatgccacacctttc
tccactccgtctgttgaagccatcacggagcagctccacagggctggatttcagaagtgg
ggatcagagagagtgtacagcggtcgtactggtgcaatgtgtaattcaatgatatttatg
ggccctacattctatcaaagattgattcacatggcagaagacaaagtaaaattcagaaac
actgggccagtccacccgctaactcgacaacctgttgcagataggaaacgttttggtggg
atcaagtttggtgagatggaacgtgattgtctcatcgctcatggagcatcagccaacttg
tacgaacggctttttacccttagcgattgctctcagatgcacatttgtcgtaaatgcaag
aatgtggcaaatgtgatccaacggacagtgagtggtggacgcaagattagggggccatac
tgtcgagtatgcgaatcagtcgatgacattatcaaaacaaatgtgccttatggtgccaag
ttactataccaggagctgttcagtatgggtattaatctgaagtttgaaacagaatactgt
taa

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