KEGG   Mangifera indica (mango): 123200671
Entry
123200671         CDS       T07684                                 
Name
(RefSeq) cyclin-H1-1 isoform X1
  KO
K06634  cyclin H
Organism
minc  Mangifera indica (mango)
Pathway
minc03022  Basal transcription factors
minc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    123200671
  09124 Replication and repair
   03420 Nucleotide excision repair
    123200671
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:minc03021]
    123200671
   03400 DNA repair and recombination proteins [BR:minc03400]
    123200671
Transcription machinery [BR:minc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     123200671
DNA repair and recombination proteins [BR:minc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     123200671
SSDB
Motif
Pfam: Cyclin_N Cyclin_C_2 TFIIB RB_B
Other DBs
NCBI-GeneID: 123200671
NCBI-ProteinID: XP_044471932
LinkDB
Position
2:23735234..23740162
AA seq 350 aa
MSDFQTSTHRAKWIFTPQELVAKYRASNRRAIQTLEEYGTTQMEVDIDGSFSYPEPQKDN
AEKHSRPKPLSIEEEQSMRVFYENKLREVCSAFYFPNKIQATALLYFKRFYLQWSVMEHH
PKNIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNYEMIVYQAWVVWNLILLFMLHT
GHLKVLSLIWRSDWLICFVYRCFSLIYEFCQATNGQLQMLKDLHESAKLEVDRIMLTDAP
LLFPPGQLALAALRCANNVHRVLDFERYIEGVLSRQNSAHTYPELLEYLDAIDSWVMKYK
FPSEKDMKHINRKLKSCWGHSSHDEGKKREKKSKHKSKSSNEMQNGPTLV
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgtccgattttcagacctcaactcaccgagccaagtggattttcactcctcaagaactt
gttgcaaagtacagagcttctaatcgaagagcaatacaaactctggaggagtatggaaca
acgcaaatggaagtagatattgatggatcattttcatacccagaacctcaaaaagacaat
gctgaaaagcattctcgtccaaaacccctcagtattgaagaagagcagtcaatgcgtgta
ttttatgaaaataaacttcgagaagtatgtagtgcattttacttccctaataaaattcag
gcaacagctctcttatactttaaaagattctacctgcaatggtcggtcatggaacatcac
ccgaaaaatataatgttaacatgtgtatatgctgcttgtaagatagaagaaaatcatgta
tcagcagaggagcttgggaagggcatctcacaggatcaccaaatgattctcaactatgaa
atgattgtttatcaggcatgggtggtttggaatttgatcttattgtttatgctccatacc
ggccacttgaaggttttgtcattgatatggaggtcagattggttaatttgcttcgtatat
agatgcttctctctcatatatgaattctgtcaggcaacaaatggccagttacaaatgttg
aaggatttgcatgaatctgcaaagttggaagttgacagaatcatgcttactgatgcacca
cttttgttcccccctgggcagttggcattggctgctttgcgctgtgcaaacaatgttcac
agggttctcgactttgagagatatatagaaggtgttctctctcgacagaattctgcacat
acctatccagagctccttgaatatttagatgccatagattcttgggtaatgaaatataag
ttcccttctgaaaaggatatgaagcacatcaaccgcaaactaaaatcttgttggggccat
agctcacatgacgagggtaagaaacgggaaaaaaaatcgaagcacaagtccaagagctca
aatgaaatgcaaaatgggcctactcttgtgtaa

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