Mangifera indica (mango): 123200803
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Entry
123200803 CDS
T07684
Name
(RefSeq) autophagy-related protein 18b
KO
K17908
autophagy-related protein 18
Organism
minc
Mangifera indica (mango)
Pathway
minc04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
123200803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
minc04131
]
123200803
03029 Mitochondrial biogenesis [BR:
minc03029
]
123200803
Membrane trafficking [BR:
minc04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
123200803
Mitochondrial biogenesis [BR:
minc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
123200803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
WD40
Beta-prop_Vps41
Beta-prop_EML_2
WD40_CDC20-Fz
BCAS3_WD40
WD40_MABP1-WDR62_1st
WDR55
Motif
Other DBs
NCBI-GeneID:
123200803
NCBI-ProteinID:
XP_044472124
LinkDB
All DBs
Position
17:complement(11140143..11145834)
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AA seq
373 aa
AA seq
DB search
MSSQSSPTSYPVLFVSFNQDNRGFAISTKDGIKIFDSSTGRLCYELAVGAFIIVEMLYSS
SLLAIVGAGEQPSLSPRCLCLFNTTNGTALRDLKFLTSILAVRLNRERLVVVLRDKTFIY
DADTLAILDTIDTVPNLKGLCAFSPSLDACFLALPASTSRGSVLVYNVMKLQSHCEIDAH
RSPLAAMVLSSNGMYIATASEQGTIIRVFLVSEATKAYSFRRGTYPSTIYSLSFGPSVQT
QDILVATSSSGSVHVFSLGFAINQRRRRSNSFRSLLPESVNDVLDPAHHAVLHHAFPAGV
KSCAVVRKVDRVMDRSSAEFVSYRAYISIITYNGLFQEYSFSINRSTIDVQYESLWSLER
EFNVLATAADRYH
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtcagtcctctccgacgtcgtatccggtcctcttcgtttctttcaatcaagac
aaccgtggctttgctataagcacaaaggatggcatcaagatatttgattcgagtacgggc
agactctgctatgaactagcggttggagctttcataattgttgaaatgctatatagctct
agtcttcttgccattgttggagctggtgaacagccatctttatcaccacgttgtctctgt
ttatttaatactacaaatggaactgctcttcgagatttgaaatttttaacttcaatccta
gctgttcgcttaaatagagaaagacttgtggtcgtcctgcgagataaaacattcatatat
gacgcagatacactcgcaattttggacactattgatacagtgcctaatttgaaaggactt
tgtgcattttccccaagtttggatgcttgtttcttggctctacctgcaagtacatccaga
ggatcagttttggtctataatgtcatgaagctccagtcacattgtgagattgatgctcat
cgctcaccattggctgcaatggtcctttcttccaatgggatgtacattgcaacggcttct
gagcagggaaccataatcagagtttttctggtatcagaagcaactaaggcatatagtttc
cgaagggggacatatccatcaaccatatattccttgtcatttggaccatcagtgcagact
caagatattcttgtagcaacaagttcatcaggttccgtccatgttttttctctggggttt
gccattaatcaaaggaggagaagatcaaatagttttcgatcactattaccagaatctgta
aatgatgttctggatccggctcatcatgctgtacttcatcatgcttttccagcaggagtc
aaaagctgtgctgtggttcggaaggtagacagggtaatggacagatcatcagctgaattt
gtatcatatagggcctatatttcaataataacctacaacggattattccaggaatacagt
ttcagcatcaacaggagcaccatcgatgtgcagtatgagtcattgtggagtttggagcgt
gaattcaatgttttggccacggctgcggacagataccactga
DBGET
integrated database retrieval system
