Mangifera indica (mango): 123201302
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Entry
123201302 CDS
T07684
Name
(RefSeq) E3 SUMO-protein ligase MMS21-like isoform X1
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123201302
03400 DNA repair and recombination proteins [BR:
minc03400
]
123201302
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
123201302
DNA repair and recombination proteins [BR:
minc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
123201302
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Nse
zf-RING_UBOX
zf-MIZ
zf-C3HC4
zf-C3HC4_2
Rtf2
zf-ANAPC11
YkyA
zf-RING_2
zf-rbx1
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
123201302
NCBI-ProteinID:
XP_044472682
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Position
18:complement(10210572..10215287)
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AA seq
254 aa
AA seq
DB search
MASTSGSRHDGLTERIRNATTTLYSENNSLLGEIRKAMSLMKEVAVDLERDNQSQMVKKL
EDAAMQLSEAYGDCTHYSSSIESIGNLYEPGTELTDFKKLLEGELVKSKTASSSFPQKES
LMRQFREAVWNVHHAGEPMPGEEQEDVIMTSTQCNLLNFTCPLSGKPLTELADPVRSVEC
KHIYERDAILAYIKSKNKNGRCPVAGCPKILKAAKVVCDPLLQVEIEEMRSMNNRNARPN
VIEDCTGLDDEENA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcatctacctccggttctcggcacgacggtctaaccgaaagaatccgaaacgccacc
acaactttatacagtgagaacaactccctccttggtgaaattcgaaaagcaatgagtttg
atgaaggaggttgcagttgatttagaaagagataatcaatctcaaatggtgaagaaacta
gaggatgctgctatgcagctgtcagaagcttatggagactgtacacattattcatcatcc
attgaatcaattggaaatttatatgagcctgggacagagttaacagattttaagaagttg
cttgagggtgagcttgtgaagtccaagactgcttcatcatcttttccacaaaaggaatca
ctgatgcgtcaattcagagaagctgtctggaatgttcatcatgcaggagaaccaatgcca
ggggaagagcaggaggacgttataatgaccagtacccagtgcaaccttttgaatttcact
tgtcctttgagtggaaaaccccttactgagttagcagacccagtccgaagtgtggagtgc
aagcatatatatgaaagggatgcaatcttggcctatattaaatccaagaataaaaatggc
cgatgcccggtagcagggtgccccaagattctgaaggcagcaaaagttgtgtgtgaccct
ctgttacaggttgaaatagaagaaatgcggtcaatgaacaatagaaatgccaggcctaat
gtgattgaagattgcacagggcttgatgatgaagaaaatgcgtaa
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