Mangifera indica (mango): 123202005
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Entry
123202005 CDS
T07684
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
minc
Mangifera indica (mango)
Pathway
minc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123202005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123202005
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123202005
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
123202005
NCBI-ProteinID:
XP_044473638
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All DBs
Position
18:12354626..12359346
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AA seq
323 aa
AA seq
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MANLPQSLSLNAPFGGGPSASIPSAAAAAAGAGATKDRKMASAEHLVLDLSNPDLRENAL
LELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQC
VASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKFDDTEVISFLL
STEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAA
LAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSTCLREDPTTRRWLQQL
LHNVGVNRVPALQAGGFDHMLVN
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatctgcctcagtctctgtccctcaacgcgccgtttggtggtggacccagtgca
tcgatcccgagcgccgccgctgcggccgctggagctggagctactaaggaccggaaaatg
gcgtcggcagaacacttggttctcgatctaagcaatcccgatttgagagaaaacgcactc
cttgagctatccaagaagagagaattatttcaagatttggctcccttgttgtggaattct
tttggtactattgcagcattattacaggaaatagtttcaatataccctgttctatcacca
ccaaacctcactcctgcacaatcaaatagagtttgcaatgctcttgcacttcttcagtgt
gtagcctctcatccagacacaagaatgttgtttctaaatgctcatatacctttatatctg
taccctttcctaaatacaacaagcaagtcaaggccctttgagtacttgaggctaactagc
ttaggtgtcattggtgccctggtgaagtttgatgatactgaagttattagcttccttctt
tcaacagaaattattccactctgcctgcgcaccatggagatgggcagtgaattgtcaaaa
acagttgctacatttattgtccagaaaatcttgttggatgatgtgggcttggattatatt
tgtactacagcagagaggttctttgcagtgggacgagttttaggtaacatggttgcagca
cttgctgagcaaccctcatcgcggctgttgaaacatattattcgatgttatctccgactc
tctgacaacccaagggcttgtgacgcattgagaagttgcctcccagacatgttaagagat
gccaccttcagtacttgccttagagaagatccaactacaaggaggtggctgcaacagttg
cttcacaatgtgggagtcaatcgagttccagcacttcaagccggaggattcgatcatatg
ctggtgaactga
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