KEGG   Mangifera indica (mango): 123202274
Entry
123202274         CDS       T07684                                 
Name
(RefSeq) splicing factor 3B subunit 4-like
  KO
K12831  splicing factor 3B subunit 4
Organism
minc  Mangifera indica (mango)
Pathway
minc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123202274
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:minc03041]
    123202274
Spliceosome [BR:minc03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    123202274
 Complex B
    123202274
 Complex C
   U2 SnRNP specific factors
    123202274
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB RRM_5
Other DBs
NCBI-GeneID: 123202274
NCBI-ProteinID: XP_044474035
LinkDB
Position
18:complement(5013053..5022422)
AA seq 374 aa
MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR
VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
NRQITVSYAYKKDTKGERHGTPAERILAANNPGAQKSRPHTLFASGPPSLQNVQANGVVG
GAMPPRPFANGAAPGPIPAVRPAPPPPQAGAFPSIQVAGQAVWQGQPPQLGQGVPQQILP
PPSMLYRPPPPNMPPPPQVLSMHQRPPPPPMGMGGQPPVWQPPPPLQQQLGRPPMQHMGM
APPPPPSVPPAPPS
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgacgactcgaatcgctcccggagtcggagccaatttgctcggccaacactctgccgag
cgaaaccaagacgcaaccgcctatgttggcaatctcgatccacaggttacagaagagtta
ctgtgggagttgtttgttcaagctggtcctgttgttaatgtgtatgttccaaaagataga
gtgacaaaccttcatcaaggatatggatttgtagagttccgaagtgaagaagatgctgat
tatgcaattaaggtgctcaacatgattaagctctatgggaagccaatacgtgtgaacaag
gcatcccaagataaaaagagcttagatgtgggggcaaacctttttattggaaaccttgat
cctgatgtggatgaaaaactactttatgatacttttagtgcatttggagtcattgttaca
aatcccaagattatgagggatcctgatactggaaattcccgtggttttggtttcataagc
tatgattcttttgaggcatctgatgcggctattgaggcaatgaatggccagtacctttgt
aaccgtcaaatcactgtctcatatgcatataagaaagacactaaaggagaacgccatggt
accccagcagagagaattttggcagcaaataatccaggtgcccagaagagtagaccacac
actttgtttgccagtggtcctccttcgcttcaaaatgttcaggccaatggtgttgttggt
ggagccatgcctcctcggccttttgccaatggtgctgctcctggacctattccagctgtt
cgtccagcaccaccaccaccccaagctggagccttcccatccattcaggtagctggacaa
gcagtatggcagggtcagcctccgcaattaggtcaaggagtaccgcaacaaattctgcct
ccgccatcaatgctgtacaggccacctccaccaaacatgccaccacctccacaggtactg
tcaatgcatcaaaggccacctcctccaccaatgggaatgggtggtcaaccacctgtctgg
cagccaccaccacccctgcagcaacagcttggaagacccccaatgcaacatatgggaatg
gcaccaccgcctccacccagtgtccctccagcacctccaagttga

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