Mangifera indica (mango): 123203155
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Entry
123203155 CDS
T07684
Name
(RefSeq) small RNA degrading nuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
minc
Mangifera indica (mango)
Pathway
minc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123203155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
minc03009
]
123203155
Ribosome biogenesis [BR:
minc03009
]
Eukaryotic type
Pre-60S particles
RNases
123203155
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
G6PD_N
Motif
Other DBs
NCBI-GeneID:
123203155
NCBI-ProteinID:
XP_044475284
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All DBs
Position
19:7083804..7088885
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AA seq
571 aa
AA seq
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MPSPKHKSEAEGEAKEQDGLNNGRAGFFNIYGPQAKAEVIFKMPEANSTLNLQDVQGLVT
WVLAEGFMPSWVFIKNKPLIPKVVLLYLPGLDASLYLSQSKLLSGFKEFCGNPRALLALS
CVADSMQTIDSLLTCKLKRKRNELDSMKKSTQTSEQENDTTLMDNPSSVELLKDLPFPIT
YYTLTAKELEENGYCLNQPGFLSTIPAPLGSSPYEMLALDCEMCVTNEGFELTRLTLVDM
KGQVVLDKLVKPSNTIVDYNTRFSGITCEMLSGVTTSLKDIQEEFLKLVYKETILVGHSL
ENDLLALKISHGLVVDTALLYKHPRGGSFKTALRVLAKRFLSREIQQSGTGHDSIEDARA
TMELALLKIRNGPDFGSPPSFIRRKLLTVLSECGKTSSLIDDVSVVKRYASELSHAMAVS
SDDEALSKARKEVKNDRVHFVWTQFSELYSYFRKQVEDEAKLNGKLAEMMSLVTCDKKCT
NRKGHKNSVSSELKEILTRMDTRVRSLCAALPTNTMIIICSGHGDTAIVHRVRKMLREQT
ETLMCREKIVKVLEELQAQAEVALCFVGVKH
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctccaaagcataagagtgaagctgaaggtgaagctaaagagcaagatggttta
aacaacggtcgtgccggtttcttcaatatatatggacctcaagcgaaagcagaagttatt
ttcaagatgccagaagctaattctactctaaacttgcaagacgttcaaggccttgtaact
tgggttcttgctgaaggattcatgccttcctgggtattcattaagaacaagccattgatt
ccaaaagtggttttgctttatctgcctggcctggatgcctctttgtacttatcacaatcc
aaactactttcgggttttaaagaattctgtggcaatcccagggcacttttagccctaagt
tgtgtggcagatagcatgcagacaatagactcactgctaacttgcaagttgaaaagaaag
agaaatgagcttgattcaatgaagaaatctacccagacatctgaacaagaaaatgatact
acacttatggataatccatcttctgtggaactcttgaaagatctaccattccctattaca
tattatacacttacagcaaaagaattggaagagaatggatattgtctcaatcaaccaggc
tttctatctactattcctgctcctttgggatcttctccctatgaaatgttggcgcttgac
tgtgagatgtgtgtcacaaatgagggttttgagctcacaagactaaccctagtggatatg
aaaggccaggttgtgttagacaaattggttaaaccttcaaacaccattgtagattacaac
accaggtttagtggaattacatgcgagatgttgagtggagtaactacaagccttaaagat
attcaggaagaatttctaaagctggtttacaaagagaccattctagttgggcattccttg
gagaatgacttgttagctttgaagatttcccatggtttggtggttgatactgcacttcta
tacaaacacccaaggggtggatcttttaaaactgctcttagagttcttgccaagagattt
ctttctagggagatacaacagtcaggaactggacatgacagtattgaagatgcaagagct
actatggagctggcacttctgaaaattagaaatggacctgattttggttctcctccatca
tttattcggagaaaacttcttacggttttgagtgagtgtggaaagacctcctctctcatt
gatgatgtttcagtagtcaagagatacgcctctgagttatcccatgcaatggcagtgtct
tctgatgatgaagctctttcaaaggctagaaaggaggtgaagaatgatcgggtacacttt
gtctggactcagttctcagagctatattcgtatttcaggaaacaagtagaggatgaagca
aagctgaatggaaaacttgcagagatgatgtcattggttacatgtgataaaaagtgtacc
aacaggaaaggccataaaaacagtgtttcatctgaactaaaggaaattctgacccgtatg
gatactagggttcgtagtctctgtgccgcattacccaccaataccatgattataatttgc
tctggacatggagacacagctatcgtccatagagtaaggaaaatgctcagagagcagact
gaaacattgatgtgccgtgagaagattgtgaaggtcttggaagagcttcaggctcaagct
gaagttgcattgtgttttgtcggcgtgaagcattga
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