Mangifera indica (mango): 123203192
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Entry
123203192 CDS
T07684
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
minc
Mangifera indica (mango)
Pathway
minc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123203192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
minc04131
]
123203192
Membrane trafficking [BR:
minc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
123203192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
EF-hand_FSTL1
N1221
Motif
Other DBs
NCBI-GeneID:
123203192
NCBI-ProteinID:
XP_044475367
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All DBs
Position
19:complement(12859827..12867021)
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AA seq
789 aa
AA seq
DB search
MMSNVDEDEEKWLAEGIAGVQHNALYMHRALDSNNLREALKYSAQMLSELRTSKLSPHKY
YELYMRAFDELRKLEMFFKDESRHGVSIVDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDVLKDLVEMCRGVQHPIRGLFLRSYLAQVSRDKLPDVGSEYEGDANTVMDAVEFVL
QNFTEMNKLWVRMQYQGPGRIREKREKERNELRDLVGKNLHVLSQIEGVDLEMYKDNVLP
RVIEQVVNCKDELAQSYLMDCIIQVFPDEYHLQTLETLLGACPQLQPTVDIKTVLSRLMD
RLSNYAASSTDVLPEFLQVEAFAKLSNAIGKVIDAQVDMPILGAITLYVSLLSFTLRVHP
DRLDYVDKVLGACVAKLSSIPKLEDSRAMKQVVSLLSAPLEKYNDIVTVLTLSNYPRVMD
HLDNGTKKVMAMVIIQSIMKNCTCISTDEKVEVLFELLKGLIKDVDETAEDELDEEDFKE
EQNSVACLIHMLYNDDLEEMLKIICTVRKHIMTGGPKRLPFTVPPLVFSALRLVRRLKSQ
DGDVAGEEEPATPKKIFQILSQTIEALSSVPSPELALRLYLQCAEAAGDCDLEAVAYEYF
TQAFVLYEEEIADSKAQVTAIHLIIGSLQRMNAFGVENRDTLTHKATGYSARLLKKPDQC
RAVYACSHLFWVDDQDGLKDGERVLLCLKRALRIANAAQQMAIIARGISGPVILFVEILN
KYLYFFEKGNSQITSSAIQSLVELIRTEMQSDSTPDPAASAFFSSTLRYIEFQKQKGGIM
GEKYDSIKV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgaacgtggatgaggatgaagagaaatggctggccgaagggatcgctggcgtt
caacataacgccctgtacatgcatcgcgctttggactctaataatctcagagaagctctc
aaatattcagctcagatgctctcggagcttcgaacttccaaactttctcctcacaaatac
tatgaactctatatgcgagctttcgatgagttgaggaagctggagatgtttttcaaagat
gaaagcaggcatggtgtatcaattgttgatttatatgagcttgttcaacacgctggcaat
atattgcccagactgtatctcctatgtactgttgggtccgtgtacattaaatctaaagag
gctcctgctaaggatgtcctaaaagatcttgtggaaatgtgtcggggtgttcaacatcca
attcgtgggttatttttgaggagttatcttgctcaagtcagcagagataaattgcctgat
gttggttctgaatatgaaggagatgctaacactgtgatggatgctgtagaatttgtgcta
cagaacttcactgagatgaataaactttgggttcgaatgcagtatcagggacctggtcgg
ataagagagaagcgggagaaggaaaggaacgaacttcgtgatcttgtagggaaaaacctt
catgttctcagtcagattgagggtgtggaccttgagatgtacaaagacaatgttcttcct
agagttatagagcaggttgtgaattgtaaagatgaacttgctcaatcttatctgatggat
tgcataattcaggtcttccctgatgagtatcatttgcagacccttgagacactgttgggt
gcttgccctcagcttcagccaacagttgacatcaagacggtgctatctcgactaatggat
aggttatcaaactatgctgcttcaagcacagatgtgttacctgagtttctacaagtggaa
gcttttgctaagttgagcaatgccattggcaaggtgatagatgcacaggttgacatgcct
attcttggagctataactttgtacgtctctcttctttcatttacgcttcgtgttcatcct
gatcggcttgattatgttgacaaagtcctgggagcatgtgttgcaaagctatccagcata
ccaaagcttgaagacagcagggcgatgaaacaagttgtttcgcttttaagtgctccactg
gaaaagtacaatgatattgtcactgtcttgactctttctaattatcccagagttatggac
caccttgataatggaacaaaaaaagtcatggcgatggttattattcagagcattatgaaa
aattgcacttgcatctcaactgatgagaaggttgaggtgttgtttgaattactaaagggg
ctcattaaagatgtggatgaaactgcagaggatgagcttgatgaggaggatttcaaggaa
gaacagaattctgttgcttgtctcatacacatgctttataacgatgacttagaggaaatg
ttaaagattatatgcactgtgaggaaacatatcatgactggaggaccaaaacgactacca
tttacagttcctcctcttgtgttctctgcactgaggttggttaggcgattgaagagtcag
gatggagatgtagctggagaagaagaacccgcaacaccaaaaaaaatatttcagatcttg
agtcagactattgaggctctttcttctgttccatctcctgaactggcattgagattgtac
ttgcaatgtgctgaggctgctggtgactgtgatcttgaggctgttgcctatgaatatttc
actcaggcgtttgtattatacgaagaagaaattgcggattccaaagcccaggtcactgcc
atacatctgattataggatcccttcagaggatgaatgcctttggtgttgagaatcgggat
actctgacgcacaaggctacagggtattcagctaggttattaaagaagcctgatcaatgt
cgagcagtttatgcttgttcgcatctgttttgggttgatgatcaagatggccttaaagat
ggagaaagggtattgctttgcctaaagcgtgccttgaggattgcaaatgctgctcaacaa
atggccattattgcacggggtatcagtgggcctgtcatactctttgttgaaatactgaac
aagtacctgtacttttttgagaaaggaaattcacagatcacaagttcagcaattcaaagc
ctggttgaattgatccgtacggaaatgcagagtgactcaactccagatccagctgcaagt
gctttcttttcaagtacgttgcggtatattgaattccagaagcaaaaaggtggtataatg
ggtgagaaatatgattccatcaaggtgtga
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