Mangifera indica (mango): 123203241
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Entry
123203241 CDS
T07684
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
minc
Mangifera indica (mango)
Pathway
minc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123203241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
minc04121
]
123203241
Ubiquitin system [BR:
minc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
123203241
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GFIT
Motif
Pfam:
LRR_6
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
123203241
NCBI-ProteinID:
XP_044475456
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Position
19:complement(7205039..7208875)
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AA seq
373 aa
AA seq
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MVGEATNLWSEELNLCFEKLMMIGGKNSGVVKMDGSAITEWKDIPMELLLRIVSLVDDQT
VVRASGVCCGWRDAICSGLTHLSLSRCKKNMNNLVLSLAPKFTKLQTLVLRQDKPQLEDN
AVEAIANSCHDLQDLDLSKSFNLSDHSLGALGHGCPNLIKLNISGCTAFSDHALAYLTEH
CQKLKILNLCGCVKAATDHALQAIGRNCSQLQSLNLGWCENVGDLGVMSLAYGCPDLRSL
DLCGCVDITDDSVIALANRCLHLRSLDLYYCRNITDRAMYSLAQSRVKNKPAMWESMNKS
RYDEEGLKSLNISQCTALTPSAVQALCDTFPALHTCSGRHSLVISGCLNLTSVHCACAVQ
AHRATNSIPHSAH
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggttggtgaagcaacaaacttatggagtgaggagctgaacctgtgctttgagaagttg
atgatgattggtggcaaaaatagtggggttgtgaagatggacggttcggccatcactgag
tggaaagatatccccatggagctcttgttgaggatcgtgtcacttgttgatgatcagacg
gtcgtcagggcttctggggtttgttgcgggtggagagatgccatttgttcgggccttacc
catctatccctctctaggtgcaagaaaaacatgaacaatttggttctgtctcttgcccca
aaattcacaaaactgcaaactctggtgttgcgccaagataagccacaacttgaggataat
gcagttgaagctattgcaaattcttgtcatgatttgcaggacctggaccttagcaaaagc
ttcaatctgagtgatcactccttgggtgccttgggtcatggttgtcctaatcttattaaa
ctcaatatcagtgggtgtacagctttcagtgaccatgctcttgcatatctcacagagcat
tgtcagaaactaaaaattttaaatctctgtgggtgtgtaaaagctgcaactgatcatgca
ttgcaggctattgggcgtaactgtagtcagttgcagtctttaaatcttggatggtgtgag
aatgttggggatttaggagttatgagtttagcatatggatgcccagatctcagatccctt
gacttgtgcggctgtgttgacataacagatgacagtgtgattgcattggcaaataggtgt
ctccatctgagatcccttgatttgtactattgtcgcaacatcacagacagagcaatgtat
tcgctggcccaaagccgagtgaagaacaaacctgccatgtgggaatccatgaacaaaagt
aggtatgatgaggaagggcttaaaagtctcaacattagccagtgcactgcactgactcct
tcagctgttcaggcattatgcgatacatttcctgctctccatacctgctccgggaggcat
tcccttgtcataagtgggtgtttgaatttaacttctgtgcattgtgcctgtgctgttcag
gcacatcgtgcaacaaactctattcctcactcagctcattga
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