Mangifera indica (mango): 123203907
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Entry
123203907 CDS
T07684
Name
(RefSeq) plant-specific TFIIB-related protein PTF2-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
minc03021
]
123203907
Transcription machinery [BR:
minc03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
123203907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRF2-like_C_cyclin_rpt
TFIIB
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
123203907
NCBI-ProteinID:
XP_044476320
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All DBs
Position
20:8894486..8898144
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AA seq
531 aa
AA seq
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MSCTSCSSKSLTHDQISGNLICSSCGTVQSFDNFDPQTYGRDGPIGSYIQVGSSGTGSVL
NYKDKKVYESKKLIDEYTYKLNLTGKKSTDVKNMIDKITEGEFGLGDWFPILIGACGYVV
MRMENKSLPLGEIASVLNCDVYELGRMVNRVVEFLDLKLPEFDIVVMFERVFCNTKLPRL
VELERDKLGQMRQQGVFLLNCAVKWFLTTGRKPMPLVAAVLVFVAELNGVSLRIEDVAKE
LYCVLGTCRKRYSELLEVLVKVAQVLPWGKYVNVKNIVKNAPFVMRYMELKSREKKTEDK
EGPKCGGVDFDDVVRECLEKDFEYGIDEDKVESYSSYFDMDDRSGPMRRGVENGNKIELS
HECLGMIYAKFLNEVDGRSLLRETEEVHGRKRRRGFELSGCREWWNGKSEMSQKLMLKKI
LEKDVGLDVMPPSFVNGCMENEKRRAKINSAKVRINKIMNPSSSDTGDNDNVASSECVLN
GKRRKRKQIGEIDWEDFIIETLLLHQVKEEDIETGHYNTLLALHVFNCENM
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcacaagctgctcttcgaagtctctaacccacgatcaaatatccggcaacctg
atatgctcgtcgtgcggcacggtccagtcatttgacaattttgatccccaaacctacggc
cgtgacggccccattggaagttacattcaggtgggttcgtcaggtaccggctctgtctta
aactataaagataagaaagtctacgaatctaagaaattaatagatgaatatacttataaa
ttgaatttgactggtaaaaaatccactgatgtcaaaaacatgattgataaaatcactgag
ggtgaatttgggttgggggattggtttccaattttaatcggtgcttgtggatatgttgtt
atgagaatggagaataaatcattaccattgggtgaaatagcgtctgttttgaattgtgat
gtgtatgaattaggaaggatggttaaccgtgtggttgagtttttggatttgaagttgcct
gaatttgatattgttgttatgtttgagagagtgttttgtaatacgaagttgccaagattg
gttgaattggagagggataagttggggcagatgaggcaacaaggagtgtttttgctgaat
tgtgcggtgaagtggtttctgacaacagggaggaagccaatgccattggtggcagctgtt
ttggtgttcgtggcagaattgaatggggttagtttgaggattgaggatgttgccaaggag
ttatattgtgtacttggaacatgtagaaagcgatactcggagttgttggaagtacttgtg
aaggtggctcaagtgctgccatggggaaagtatgtgaatgtaaagaatatagtgaagaat
gccccttttgtaatgcgttatatggagttgaagtccagggagaagaaaacagaagacaaa
gaagggccaaagtgtggtggggttgattttgatgatgttgttagggagtgtttggaaaaa
gattttgagtatgggattgatgaggataaggtggaaagttattctagctattttgatatg
gatgatagaagtgggcctatgagaagaggggttgaaaatggtaataagattgagctttct
catgaatgcttgggaatgatttatgctaaatttttaaatgaagttgatggtaggagtttg
ctaagagagactgaggaggtacatggaaggaagagaaggagagggtttgagcttagtgga
tgtagggaatggtggaatggaaaatcagaaatgagccagaagcttatgcttaagaaaatt
ttggagaaagatgtaggactggatgttatgcctccttcttttgttaatggttgcatggaa
aatgagaagaggagggctaagataaattctgctaaggttaggattaataagattatgaat
ccatccagttctgatacaggtgataatgacaatgttgcctcttcagaatgtgttcttaat
gggaaaaggagaaagagaaaacaaattggtgaaattgattgggaagactttattattgag
acactcctccttcatcaggtgaaagaagaggatattgagacaggacattacaatacccta
ttggccttgcatgtgttcaactgtgagaacatgtga
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