KEGG   Mangifera indica (mango): 123204059
Entry
123204059         CDS       T07684                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
minc  Mangifera indica (mango)
Pathway
minc03030  DNA replication
minc03410  Base excision repair
minc03420  Nucleotide excision repair
minc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:minc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    123204059
   03410 Base excision repair
    123204059
   03420 Nucleotide excision repair
    123204059
   03430 Mismatch repair
    123204059
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:minc03032]
    123204059
   03036 Chromosome and associated proteins [BR:minc03036]
    123204059
   03400 DNA repair and recombination proteins [BR:minc03400]
    123204059
DNA replication proteins [BR:minc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    123204059
  DNA Replication Termination Factors
   ELG1-RFC complex
    123204059
Chromosome and associated proteins [BR:minc03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    123204059
DNA repair and recombination proteins [BR:minc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     123204059
  Check point factors
   HRAD17(Rad24)-RFC complex
    123204059
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_lid_RFC1 Mg_chelatase nSTAND_NTPase5 AAA_22 Rad17 AAA_16 Viral_helicase1 RCF1-5-like_lid RuvB_N AAA_5 AAA_11 nSTAND3 AAA_assoc_2 DNAX_ATPase_lid AAA_19 AAA_28 bpMoxR IstB_IS21 AAA_3 AAA_30 RNA_helicase ABC_tran AAA_25 KTI12 SLFN-g3_helicase AAA_24 MeaB AAA_7 DUF815 AAA_18
Other DBs
NCBI-GeneID: 123204059
NCBI-ProteinID: XP_044476537
LinkDB
Position
20:complement(8159649..8162639)
AA seq 334 aa
MASSSSSFSSSNLYDIPWVEKYRPNKISDIVGNEDAVSRLQVIARDGNMPNLILSGPPGT
GKTSSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLTPGKHKIVIL
DEADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEILG
RLMVVVQKEQVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHP
LHVKNMVRNVLEGKYDDACSGLKQLYDLGYSPTDIITTVFRIIKSYDMAEYLKLEFMKET
GFAHMRICDGVGSYLQLCGLLAKLSLVRETAKAP
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggcatcgtcgtcttcttcgttttcgagtagcaatctctatgacatcccgtgggttgag
aagtatcgtccaaacaaaatctccgatatcgtcggcaacgaagacgcagtctccaggctc
caagttattgctcgcgatggcaacatgccgaatctaatcttatctggtcctccgggaact
ggtaaaacatctagtattttggcccttgcacatgagctgttggggccaaactataaggag
gctgttttggagcttaatgcatcagatgataggggtatagatgttgtgagaaacaagatt
aagatgtttgcccaaaagaaagtgacactcactccagggaagcacaaaatagtaattctt
gatgaagctgatagtatgacatctggtgctcaacaagccttgaggcgtacaatggaaatt
tactccaactctactcgatttgcccttgcgtgcaatacttcttctaagattattgagcca
attcagagtagatgcgccattgttcgattttcaagattatctgatcaagagatactcggt
cgcctcatggtggtggttcaaaaagaacaggttccttatgtgcctgaaggtcttgaagca
attattttcacagctgatggtgacatgaggcaggcattgaataacttgcaagctacatac
agtggatttcggtttgttaaccaggaaaatgttttcaaggtatgtgaccagcctcaccca
ttgcatgtcaagaatatggtccgcaacgtgcttgaggggaaatatgatgatgcttgttct
ggtctgaagcagctctatgatttgggttattcccctactgacattatcaccaccgttttc
cgtatcataaagagctatgacatggctgagtatctaaaattggaattcatgaaggaaact
ggttttgcccatatgagaatatgtgatggagttggttcatatcttcagctatgtggtctt
ctggctaagctttcccttgttcgtgaaacagctaaagcaccataa

DBGET integrated database retrieval system