Mangifera indica (mango): 123204062
Help
Entry
123204062 CDS
T07684
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
minc
Mangifera indica (mango)
Pathway
minc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123204062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123204062
03036 Chromosome and associated proteins [BR:
minc03036
]
123204062
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123204062
Chromosome and associated proteins [BR:
minc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
123204062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
123204062
NCBI-ProteinID:
XP_044476539
LinkDB
All DBs
Position
20:2014719..2022694
Genome browser
AA seq
1039 aa
AA seq
DB search
MFGSTNPFGQSSSSPFGSQSVFGQTNNASNNPFAPKPFGTTTPFGSTGSMFGGTSTGVFG
AAQTSPFSSTTTFGASSSPAFGSSMPAFGASSTPAFGSSSSAFGGSSVFGAKPAFGFGST
PTQTSPFGGTTQQSQPAFGSSLFGSSTPFGASSQSAFGATSSPAFGAASTPAFGAASTPA
FGATSTPAFGATSTPTFGSTGTTFGASTAPAFGSGGAFGASSTPLFGSSSTPAFGASSTP
AFGASSTPAFGASSALPFGASSTPAFGASSAPAFGASSSASFSFGSSPAFGQSTSAFGSS
PFGTSTSPFGAQSSPFGSQATTPTFGSTPFGQSNIGVQRGGSRVAAYTPTTEADTGSSTQ
PAGKLESICAMPVYKDKSHEELRWEDYQLGDKGGPPPAGQSAGGIGFGVSAAPSSPFAAP
SVFGASSASPFSSTTSSNLFAPKTSTFTGSSFGTTTSTAFGASPFGVSSAPNPFGSTSSA
APSIFGLGTSTSAFGANSSPPTFGSSPSLFNSTAAQGTMSSFGSGLNFGSQSSPLFSSAA
PGQAGSGFGLTTSSFGNSSTMSSFGTSNIFSTPSTGFSGGIFSSTPSLAPSSTPLFGQPT
PSVSMPFQLGQPAQTGGTFGFSNLGQTHAGAGNTSNFTGSLGTLGQNNFGQLSATPSSVA
VQPIVVTNPFGTLPAMPQMSIGRAGTAPSIQYGISSMPVVEKSAPVRISSLLTSRHLSQR
RIRLPARKYNPKNDGLKVPFFVDDEETPSTPKADALFIPRENPRSLVIRPTEHFPLGASA
AKTSLKNTSHVPENGKIPEDGSNSEDKDKNPLEYGAVKDRVHPVKIDHKQNGVRDDRTVE
RDDSYMTLSGHRAGEAAIVYEHGANIEALMPKLRRSDYYTEPRIQELAAKERAEPGYSRC
VKDFVVGRHGYGSIKFLGETDVRRLDLESLVQFNNREVIVYMDDSKKPPVGQGLNKPAEV
TLLNIKCFDKKTGIQYTEGPKIDRYREMLKRKAEDQGAEFLSYDPVKGEWKFRVNHFSEY
KLEDEEEEEDQNGSAAPGC
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctcaactaacccttttgggcagtcatctagtagcccatttgggtcccaatca
gtctttggacagaccaacaatgcaagtaacaatccttttgctcccaaaccatttggtacc
acaactccttttggttcaacaggttccatgtttggtggcacttcaaccggtgtatttggt
gctgcccagacttcacctttctcgtctacaacgacctttggtgcatcatcatcaccagcc
tttggaagttcaatgcctgcttttggagcatcctccactcctgcctttggtagctcatca
tcagcatttggtggttcttctgttttcggtgcaaagcctgctttcggctttggctccact
cctactcaaacaagtccttttggaggcacaactcagcaatcacagcctgcatttggaagc
agtttatttggttcctccacaccttttggtgcatcaagtcagtcagcatttggtgcaaca
agcagccctgcctttggggctgcaagtacccctgcctttggggctgcaagtactcctgcc
tttggggctacaagcaccccagcctttggtgctacgagcactccaacctttggtagcaca
gggactacatttggtgcatcaactgctccagcttttggttctgggggagcatttggggct
tcaagcacccctctatttggatcatcaagcacccctgcatttggagcctctagcactccc
gcttttggggcttcaagcactcccgcttttggggcctctagtgctcttccttttggggct
tcaagtactcctgccttcggtgcttcaagtgctcctgcctttggggcatctagttctgca
tctttcagttttgggtcctcgcctgcttttggccagtcaacttctgcatttggtagcagc
ccatttggaaccagtacatccccctttggagcacagagttcaccatttggatcccaagcc
acgacaccaacatttggaagcactccatttgggcagtccaatattggggttcaacgtggt
ggaagtagagtggctgcttacacacctacaactgaagcagatactggtagtagtacgcag
cctgctggaaagttggaatcgatatgtgccatgcctgtctacaaagataaaagccatgag
gagctgagatgggaggattatcaattgggtgataaaggtggaccacctcctgctggtcag
tctgctgggggaattggctttggtgtgtcagctgctccatcaagcccctttgctgctcca
tctgtatttggtgcatcatcagctagtcctttttccagcactacatcttcaaatttattt
gctcccaaaacttcaacttttactggatcaagttttggaaccaccacatcaactgctttt
ggtgcttcaccttttggtgtgtcatctgcacccaatccttttggatcaacttcatctgca
gctccttccatatttgggcttgggacatcaacttctgcatttggtgccaattcatctcca
cctacttttggttcgtcaccatccctcttcaatagtacagcagcccagggtacaatgtca
tcatttggctctggcttgaattttggtagtcagtcatctcccttgttcagttctgctgcc
cctggacaggcaggttctggttttggactgaccacctcttcatttggaaacagtagtact
atgtcttcttttggtacttcaaatatatttagcacaccttccactggattttctggtggc
attttctcaagcactccatcacttgctccttctagcacaccattgttcggtcaaccaact
ccctctgtttctatgccatttcaactgggtcaacctgctcagactggtggtacttttgga
tttagcaacttgggtcagacacacgcaggtgcaggtaatacaagtaacttcactggctcg
ttgggaactcttggtcagaataactttggacaactgtctgccactccgagttctgttgct
gtgcaacctattgtggttacaaatccatttgggacactccctgcaatgcctcaaatgtca
attggtcgtgctggaactgctccttcaatccaatatggaatttctagcatgccagttgtt
gaaaaatcagctcctgtcagaatatcatccttattgacttctcgacatttgtcacaaagg
cggatcaggttgcctgctaggaaatataatcccaagaatgatggtctgaaggttcctttt
tttgttgatgatgaagagacacccagcactccaaaagcagatgccctttttattcccagg
gagaacccaagatctctagttattcgtcctacggaacactttcccttaggtgctagtgca
gcaaagacatcattaaaaaatacgtctcatgtacctgagaatggtaaaatcccagaagat
ggatccaattctgaagataaagataaaaatcctcttgaatatggagctgtgaaagaccga
gtacatcctgtcaaaattgatcacaaacagaatggagtccgtgatgatcgtactgtagaa
agagatgactcatatatgacactcagtggccacagagctggcgaggctgcaattgtgtat
gagcatggggccaacatcgaggcactgatgccgaagctccgacgatctgactactacaca
gaacctcggatccaagaacttgcagcaaaggaaagggctgagccaggatactctcggtgt
gttaaggactttgttgttggacgccatggctatggaagcatcaagttcttgggtgaaaca
gatgtgcgacggcttgaccttgagtctcttgttcagtttaacaaccgtgaggtgattgtg
tacatggacgatagcaagaaacctcctgttgggcaaggtcttaataagcctgcagaagta
acgctcctaaatataaaatgctttgacaaaaagactggaattcagtatacagaagggcca
aaaattgatagatacagggagatgctgaagcggaaggctgaggaccaaggtgctgaattt
ctatcctatgaccccgtcaagggtgagtggaagttcagggttaaccatttcagtgagtac
aaattggaagatgaagaggaggaagaggaccagaatggtagcgccgcaccaggttgctga
DBGET
integrated database retrieval system
