Mangifera indica (mango): 123204104
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Entry
123204104 CDS
T07684
Name
(RefSeq) plant UBX domain-containing protein 10-like
KO
K18726
FAS-associated factor 2
Organism
minc
Mangifera indica (mango)
Brite
KEGG Orthology (KO) [BR:
minc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minc03019
]
123204104
Messenger RNA biogenesis [BR:
minc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
123204104
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBX
UBA_4
UBA_8
FAF1
TAP_C
DUF5308
Motif
Other DBs
NCBI-GeneID:
123204104
NCBI-ProteinID:
XP_044476596
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All DBs
Position
20:1506602..1510545
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AA seq
467 aa
AA seq
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MVDVADKLAYFQAITGLEDPDLCTEILQAHDWDLELAISSFTSSNPPGQTSATDNNTTVD
SNSLSHDGQNSIDRSDSPGNVVAGPGLAWRLITLPYSVISGSIGLISVAVGLGLWAAGGV
LSYSLGMIGLGSSSSRNGESSARLASVSAAALEAMEFVSAFERDYGSLKPNFVSEGFMDA
LQRSRGAFKLLFVYLHSPDHPDTPSFCEGTLCSEVLAAFVNENLVAWGGSIRASEGFKMS
NSLKAARFPFCAVVMPATDQRIALLQQIEGPKSPEEMLGILQRVIEESNPVLLQARLDAE
ERRNNMLLREEQDAAYRAALEADQARERQRREEQERLEREAAEAERKLKEEEEARERAAW
EAAEREAALAKLRQEKALALGDEPEKGPNVTQVLVRFPNGERKERRFHSTAAVQLLYDYV
DSLGCLDVEDYSLVSNFPRVVYGSEKLSLSLKEAGLHPQASLFVELN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggttgatgtagccgataaattagcgtattttcaagcgatcactggcttagaagatccc
gatttgtgtacggagatacttcaggctcacgattgggacctggaactcgcgatctcatcc
ttcacctcctccaatccgccgggacaaacttcagccaccgacaataataccaccgttgat
tccaattcattgtctcatgatggtcaaaattccattgaccgctccgattctcctggaaat
gtcgttgctgggcctggtttggcttggagactaatcaccttaccttattccgtaatttct
ggaagtatcggcctcatttcggtggctgtcgggctgggtctatgggcagctggtggtgtt
ttgtcgtattctttgggaatgatcggcctgggttcgagttcgagccggaatggtgagtca
tcagctcgtctggcttcggtttcggccgcggctttggaagcgatggagtttgtgtcggcc
tttgagagagattatgggagtttgaagcctaattttgtttctgagggtttcatggacgct
ttgcagaggtcaaggggtgcgttcaagctgttgttcgtgtatttgcactcgccggaccat
cccgatacgccttcattttgcgaggggacgttgtgtagcgaggtgcttgcggcgtttgtg
aacgagaatttggttgcttggggtgggagtattagggctagtgaaggatttaaaatgagt
aatagcttgaaagctgcgaggttcccattttgtgcagtggttatgcctgccacggatcag
aggatagctttacttcaacagattgagggacccaaatctcccgaagaaatgctgggtata
ctgcagagagtaattgaagaaagcaatcctgttcttctccaagcgaggcttgatgcagaa
gaaagaaggaacaacatgcttttgcgggaagagcaagatgcagcatacagagctgcactt
gaagctgatcaagcaagggaacgccagaggagagaagagcaagaacgtttggaaagggaa
gctgctgaagctgagaggaaacttaaggaggaagaagaggctcgtgagagagcagcatgg
gaagctgcggaaagagaggctgcattagctaaattgcggcaggagaaagcccttgcactt
ggtgatgaacctgaaaaaggacctaatgtcacacaagttttggtgcgcttcccaaatgga
gaacgcaaagagaggaggttccacagtactgcagccgtccaattgctgtatgactacgtt
gattctttgggttgcttggatgtagaggattatagtcttgtgtccaacttccctagggtt
gtatatgggtcagaaaaactgtctttgtccttgaaagaagcaggattgcatcctcaggcc
agcctttttgtggagctgaactag
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